CX069592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: PSD11_MOUSE (26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 1.352e-68 Identity = 131/230 (56.96%), Postives = 170/230 (73.91%), Query Frame = -2 Query: 219 AARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 905 +ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY +++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYSKAKKL 421
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: PSD11_HUMAN (26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3) HSP 1 Score: 259.61 bits (662), Expect = 1.765e-68 Identity = 131/230 (56.96%), Postives = 170/230 (73.91%), Query Frame = -2 Query: 219 AARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 905 +ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY +++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: PSD11_BOVIN (26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3) HSP 1 Score: 259.61 bits (662), Expect = 1.765e-68 Identity = 131/230 (56.96%), Postives = 170/230 (73.91%), Query Frame = -2 Query: 219 AARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 905 +ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY +++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: PSD11_DICDI (26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.761e-68 Identity = 125/230 (54.35%), Postives = 172/230 (74.78%), Query Frame = -2 Query: 219 AARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPE-LDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 905 +ART AN IY PP Q ID+QSGILH+EEKDYKTA+SY +++LEDP A+ +LKYMLLCKIM +Q DDV +++ K GL+Y ++A+ ++ +H+KRSL +F+ ++F QL +DPI+H HL+ LY LLEQNLCR+IEP+SRVEI+HIA+LI+LP+D VE+KLS MILDKK+ G LDQG G LI+FE+ K D ++ +LETI + +VVD L+ ++ K+ Sbjct: 183 SARTNANTIYCPPKLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMKALKYMLLCKIMTNQTDDVHALVNGKIGLKYHNNRSIEAITQISKSHAKRSLHMFQEVTKEFSDQLSDDPIIHSHLTELYSNLLEQNLCRIIEPFSRVEISHIAKLIDLPVDVVERKLSLMILDKKYNGILDQGTGTLIVFEEQKEDKLFNCSLETIGALSRVVDLLYEKTNKL 412
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: RPN6_SCHPO (Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.827e-65 Identity = 126/231 (54.55%), Postives = 166/231 (71.86%), Query Frame = -2 Query: 216 AARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALEDPR-AVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKIM 905 AA+T+ANA+Y PP QG +DLQSGILHA++ D+KTAYSY F +L+D + A+ SLKYMLL +IM++ +V +++ K ++Y G +++AM+A+A AH RSL FE AL+D+K +L DPI+ HLSSLYD LLEQNL R++EP+SRVE++HIAELI L VE KLSQMILDK F G LDQG GCLI++++P+ D Y A LE I NMG VVD L A + Sbjct: 190 AAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDDDKKALSSLKYMLLSQIMLNSVSEVKSLLTGKHAIRYAGRDIEAMRAIAQAHENRSLADFEKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEGKLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEAALEVIKNMGTVVDLLIENKASAL 420
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: RPN6_YEAST (26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 2.316e-52 Identity = 113/232 (48.71%), Postives = 152/232 (65.52%), Query Frame = -2 Query: 225 AARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALED----PRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQ-YVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSA 905 AARTAAN+IY P +DL SGILH E+KDYKTA+SY ++ L +A LKYMLL KIM++ DDV I+++K + Y +DAMKAVA+A++ RSL F TAL+ ++ +L D + H ++LYDTLLE NLC++IEP+ VEI+HI+++I L VE KLSQMILDK F G LDQG G L ++E P DA Y + LE + + KVVD LF +++ Sbjct: 200 AARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGNGWLYVYETPNQDATYDSALELVGQLNKVVDQLFEKAS 431
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: YMJ5_CAEEL (Uncharacterized protein F59B2.5 OS=Caenorhabditis elegans GN=F59B2.5 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.836e-39 Identity = 90/230 (39.13%), Postives = 151/230 (65.65%), Query Frame = -2 Query: 228 ARTAANAIYVPPAQQGTIDLQSGILH-AEEKDYKTAYSYXXXXXXXFNALEDP-RAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYV-GPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAI--YPATLETISNMGKVVDSLFVRS 902 A+T N+ + P Q ++D+QSG+L+ AEE+DYKT++SY F ++ D A +LKYM+LCKIM+++ + +AG++++K + Y P + A++++ADA KRSLK F AL + K +L ED +V H +L +LE+ + R+IEPYS +E+++IA +I + + VE+ +++MILDKK G++DQ ++++ PKADA + +L+TI + K VD + R+ Sbjct: 237 AKTNTNSAFASPQLQASVDMQSGVLYSAEERDYKTSFSYFYEAFEGFASIGDKINATSALKYMILCKIMLNETEQLAGLLAAKEIVAYQKSPRIIAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSYIARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVY--PKADAANQFTRSLKTIRELTKTVDVSYSRT 464
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: CSN2_DICDI (COP9 signalosome complex subunit 2 OS=Dictyostelium discoideum GN=csn2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14 Identity = 49/177 (27.68%), Postives = 92/177 (51.98%), Query Frame = -2 Query: 342 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLL-CKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQ 869 P G I G +H EK+++ A++ ++ + R + LKY++L C +M+S + S++A P++ AM + A+ K + FE L+D + + +DP + ++ L + Q L +L++PY+R+ I+ I++ + +P VE L +ILD K G++DQ Sbjct: 235 PRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQCLKYLVLACMLMLSTINPFD---STEAKPYKNDPDILAMTNLVMAYEKNDIYAFEKILKDNRKTIMDDPFIRMYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNKIRGSIDQ 408
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: CSN2_XENLA (COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis GN=csn2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 50/195 (25.64%), Postives = 88/195 (45.13%), Query Frame = -2 Query: 285 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 869 P G I G +H E +++ A++ ++ PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 229 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 421
BLAST of CX069592 vs. ExPASy Swiss-Prot
Match: CSN2_RAT (COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 50/195 (25.64%), Postives = 88/195 (45.13%), Query Frame = -2 Query: 285 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXFNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 869 P G I G +H E +++ A++ ++ PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 423 The following BLAST results are available for this feature:
BLAST of CX069592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069592 ID=CX069592; Name=CX069592; organism=Citrus sinensis; type=EST; length=906bpback to top |