CX069591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_PONAB (E3 ubiquitin-protein ligase CHFR OS=Pongo abelii GN=CHFR PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 34/91 (37.36%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLV 743 IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+V +D+ IT +++ Sbjct: 214 ICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDML 298
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_MOUSE (E3 ubiquitin-protein ligase CHFR OS=Mus musculus GN=Chfr PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 34/91 (37.36%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLV 743 IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+V +D+ IT +++ Sbjct: 305 ICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQDML 389
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_HUMAN (E3 ubiquitin-protein ligase CHFR OS=Homo sapiens GN=CHFR PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 34/91 (37.36%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLV 743 IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+V +D+ IT +++ Sbjct: 306 ICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDML 390
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_XENTR (E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis GN=chfr PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13 Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLV 743 IC + HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+ +D+ IT +++ Sbjct: 269 ICQELLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDML 353
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_XENLA (E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis GN=chfr PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13 Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLV 743 IC + HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+ +D+ IT +++ Sbjct: 268 ICQELLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDML 352
BLAST of CX069591 vs. ExPASy Swiss-Prot
Match: CHFR_DANRE (E3 ubiquitin-protein ligase CHFR OS=Danio rerio GN=chfr PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12 Identity = 35/114 (30.70%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 471 ICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLMRSDEEVALLDSYAYITSNLVIRNGKKHRRKRAHSPIDEESDSN 812 IC ++ +D ++V PC+H FC C+S W+ RS CP CR V+ + +NH L+N+ ++ L H R+++++ +D+ IT +++ + K S DEE+ S+ Sbjct: 279 ICQDLLYDCISVQPCMHTFCAACYSGWMERSS------FCPTCRCPVERIRKNHILNNLVEAYLLQHPEKCRTEDDLRSMDARNKITQDML-------QPKVERSFSDEEASSD 379 The following BLAST results are available for this feature:
BLAST of CX069591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069591 ID=CX069591; Name=CX069591; organism=Citrus sinensis; type=EST; length=812bpback to top |