DR403913

Overview
NameDR403913
Unique NameDR403913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: POT6_ARATH (Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.209e-33
Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 1
Query:    4 GIQMSEDDVIVNIDSPGTSELR--EIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            GI+   +  I + D PGTSE+R  + +  +  K KKRVRFVVPE+PKI++E  +EL EL EARE G+AYI+G++Y+KAK GS  LK+L IN GYEFLRRNTR P   L+ PHASTLEVGMIY+V
Sbjct:  659 GIEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTEAREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHASTLEVGMIYNV 782          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.592e-32
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 1
Query:    4 GIQMSEDDVIVNIDSPGTSELREIQ-SPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            G+Q+ EDD     +   +SE+  +  SP     KKRVRFV+PES +IDR A +EL EL EAREAG+A+I+GHSYV+AK GSS +KK+ IN+GY+FLRRN+R P Y LS PHASTLEVGM+Y V
Sbjct:  662 GVQIYEDDGSDKQEPSSSSEVIMVAPSPRF---KKRVRFVLPESARIDRSAEEELTELTEAREAGMAFIMGHSYVRAKSGSSVMKKIAINFGYDFLRRNSRGPCYGLSTPHASTLEVGMVYIV 781          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 7.903e-32
Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 1
Query:   46 SPGTSELREIQSPT------VIKPKKRVRFVVPE-SPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            S G    REI SP+      V+ P+KRVRFV+P  SP+ D    +ELQELM+AREAG+A+ILGHSYVKAK GSS  ++LVIN+ Y+FLRRN+R P+YA+++PHASTLEVGMIY+V
Sbjct:  729 SRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAKSGSSFFRRLVINFCYDFLRRNSRGPNYAVTIPHASTLEVGMIYYV 843          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.337e-30
Identity = 59/101 (58.42%), Postives = 83/101 (82.18%), Query Frame = 1
Query:   67 REIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            +E  +  +   +K+ RFV+P++ ++D E  +ELQELM+AREAG+++ILGHSY+KAK GSS +K++VIN+ YEFLRRN+R PSYA ++PHASTLEVGM+Y V
Sbjct:  670 KETDTQIISPNRKKARFVLPKNAQVDSEVRRELQELMDAREAGMSFILGHSYMKAKSGSSFIKRIVINFFYEFLRRNSRGPSYAATIPHASTLEVGMVYQV 770          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.648e-29
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1
Query:   43 DSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMI 360
            DS G+S  +EI   T     KRVRF +P+  KIDRE   ELQELMEAREAG+++I G S++KAK GS  +K++VIN+GYEFLRRN+R P++A+++PH ST+EVGMI
Sbjct:  664 DSTGSSAHKEINPNTTAPKPKRVRFALPKDTKIDREVRGELQELMEAREAGMSFITGRSHMKAKSGSGLIKQIVINFGYEFLRRNSRGPAFAVNLPHVSTVEVGMI 769          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 6.706e-23
Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 1
Query:   37 NIDSPGTSELREIQSPTV-------------IKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            N ++ GTS  R  +S T+             +  ++RVRF + E  +ID +   EL +L++A+EAG+ YI+GHSYVKA++ S+ LK   I+Y Y FLR+N R P+ AL +PH S +EVGMIY+V
Sbjct:  688 NNEASGTSLTRSSRSETLRSLQSIYEQESGSLSRRRRVRFEIAEEERIDPQVRDELADLLDAKEAGVTYIIGHSYVKARKNSNFLKTFAIDYAYSFLRKNCRGPAVALHIPHISLVEVGMIYYV 811          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK9_ORYSJ (Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.951e-22
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  103 KRVRFVVPE-SPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIY 363
            K+VRFVV   SP++++  ++ELQEL EAREAG A+ILGHS+V+ K GSS LKKL +  GY FLRRN R P   L VP AS LEVGM+Y
Sbjct:  699 KKVRFVVEAASPEVEKGVVEELQELCEAREAGTAFILGHSHVQTKPGSSLLKKLAVGVGYNFLRRNCRGPDVVLRVPPASLLEVGMVY 786          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: POT2_ARATH (Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.683e-22
Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1
Query:   70 EIQSPTVIKPKKRVRFVVPE----------SPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            ++  P      +RVRF V E          S + D E   EL++L+ A+EAG A+ILGHS+VKAKQGSS +K+L +N+GY FLRRN R P  AL VP  S LEVGM+Y V
Sbjct:  685 QMAEPAPTATIRRVRFAVEENSYEDEGSTSSAEADAELRSELRDLLAAQEAGTAFILGHSHVKAKQGSSVMKRLAVNFGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVV 794          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.826e-20
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query:   70 EIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            E +SP V + ++RVRF +PE   +D++   EL  L+EA+  G+ Y++GH Y+KA++ SS  K+  I+ GY FLR+N R PS  L +PH S +EVGM Y V
Sbjct:  685 EQESPNVSR-RRRVRFELPEEDDMDQQVKDELLALVEAKHTGVTYVMGHVYIKARKNSSFFKRFAIDVGYSFLRKNCRGPSVTLHIPHISLIEVGMAYQV 783          
BLAST of DR403913 vs. ExPASy Swiss-Prot
Match: POT4_ARATH (Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 9.063e-20
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 1
Query:  100 KKRVRF-VVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 369
            ++ VRF +   S  +     +EL +L+ A+EAG+AYI+GHSYVK+++ SS LKK+ I+ GY FLR+N R P+ AL++PH S +EVGMIY+V
Sbjct:  699 RRHVRFQLTASSGGMGSSVREELMDLIRAKEAGVAYIMGHSYVKSRKSSSWLKKMAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 789          
The following BLAST results are available for this feature:
BLAST of DR403913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
POT6_ARATH3.209e-3359.68Potassium transporter 6 OS=Arabidopsis thaliana GN... [more]
POT8_ARATH1.592e-3259.35Potassium transporter 8 OS=Arabidopsis thaliana GN... [more]
HAK10_ORYSJ7.903e-3261.74Potassium transporter 10 OS=Oryza sativa subsp. ja... [more]
HAK25_ORYSJ4.337e-3058.42Potassium transporter 25 OS=Oryza sativa subsp. ja... [more]
HAK24_ORYSJ1.648e-2958.49Potassium transporter 24 OS=Oryza sativa subsp. ja... [more]
HAK7_ORYSJ6.706e-2343.55Potassium transporter 7 OS=Oryza sativa subsp. jap... [more]
HAK9_ORYSJ1.951e-2261.36Probable potassium transporter 9 OS=Oryza sativa s... [more]
POT2_ARATH9.683e-2250.00Potassium transporter 2 OS=Arabidopsis thaliana GN... [more]
HAK2_ORYSJ1.826e-2046.00Probable potassium transporter 2 OS=Oryza sativa s... [more]
POT4_ARATH9.063e-2050.55Potassium transporter 4 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246K13 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246K13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403913 ID=DR403913; Name=DR403913; organism=Citrus sinensis; type=EST; length=518bp
GGGGGGATTCAAATGAGTGAAGATGATGTCATAGTAAACATAGACTCCCC
TGGCACGTCAGAATTAAGAGAGATACAGTCGCCAACCGTAATCAAACCGA
AGAAAAGAGTGCGATTTGTTGTACCCGAAAGCCCAAAAATTGACAGGGAG
GCAATGAAAGAACTACAGGAACTTATGGAAGCTAGGGAAGCTGGGATAGC
TTACATATTAGGTCACTCGTATGTGAAAGCGAAGCAAGGGTCAAGTGCAC
TAAAGAAGCTTGTAATAAATTATGGATATGAGTTCTTGAGGAGGAACACC
AGGGTACCGTCGTATGCGTTAAGTGTACCGCATGCATCTACACTAGAAGT
GGGAATGATATACCATGTATGAGTATGATTTTGGTTTATACAGAAATTTT
AACTTACAATGTAAATGCTATTGCTATATATGTTGTGAAGTAAGATAGAA
CGCCACCATCGAGATAAAATGGAGGATTAAAGAGCTCCCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
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