CX069554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB2_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 OS=Mus musculus GN=Alkbh2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20 Identity = 65/177 (36.72%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 202 IRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 732 ++VFG+ PR G+T +SG P W P L+ + D V +V G FN +L+NRYK G D++G H DDE+ IASVSFG RDF+ + K S+ + RRT ++ L HGS+L+M T W HS+P R + + R+NLTFR +L Sbjct: 77 VQVFGKWHSVPRKQATYGDAGLTYT-FSGLTLTPKPW--VPVLERVRDRVCEVT-GQTFNFVLVNRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFIFRHKDSRGKRPRRT--------------VEVVRLQLAHGSLLMMNPPTNTHWYHSLPIRKRVLAPRVNLTFRKIL 235
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB2_BOVIN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 OS=Bos taurus GN=ALKBH2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20 Identity = 64/177 (36.16%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 202 IRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 732 ++VFG+ PR G+T +SG P W P L+ + D V ++ G FN +L+NRYK G D++G H DDE+ IASVSFG RDF+ + K S+ R L+ L HGS+L+M T W HS+P R K + R+NLTFR +L Sbjct: 98 VQVFGKWHSVPRKQATYGDTGLTYT-FSGLTLSPKPW--IPVLERVRDRV-SLVTGQTFNFVLINRYKDGQDHIGEHRDDERELALGSPIASVSFGACRDFVFRHKDSRGKHPSR--------------RLEVVRLQLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 256
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB3_BOVIN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus GN=ALKBH3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19 Identity = 70/210 (33.33%), Postives = 97/210 (46.19%), Query Frame = 1 Query: 106 SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGY--RPHPYSWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 729 S V P + ++++ F+ L +PW + T + QPR T + G YS P+P+ + P+ +L ++ G FNSLL N Y+ D V WH+DDE G P IAS+SFG R F ++ KP T E V L HG++L+M G TQ DW H VP+ + RINLTFR V Sbjct: 88 SRVCLCPGFVDLKEADSVFEQLCRDVPWKQRTGIRDDVTYQQPRLTAWY---GELPYTYSRITMEPNPH----WHPVLLMLKNQIEENTGHSFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRMFEMRKKPPPEDNGDYTYVERV-------------KIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRINLTFRTV 277
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB3_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19 Identity = 68/210 (32.38%), Postives = 98/210 (46.67%), Query Frame = 1 Query: 106 SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGY--RPHPYSWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 729 S V +P + ++++ + L +PW + T + QPR T + G YS P+P+ + P+ L ++ G FNSLL N Y+ D V WH+DDE G P IAS+SFG R F ++ KP D +R+K L HG++L+M G TQ DW H VP+ + R+NLTFR V Sbjct: 88 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWY---GELPYTYSRITMEPNPH----WHPVLRTLKNRIEENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKP----PPEENGDYTYVERVK---------IPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTV 277
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB2_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 OS=Homo sapiens GN=ALKBH2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.330e-19 Identity = 65/177 (36.72%), Postives = 86/177 (48.59%), Query Frame = 1 Query: 202 IRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 732 ++VFG+ PR G+T +SG P W P L+ I D V V G FN +L+NRYK G D++G H DDE+ IASVSFG RDF+ + K S+ R + L HGS+L+M T W HS+P R K + R+NLTFR +L Sbjct: 99 VQVFGKWHSVPRKQATYGDAGLTYT-FSGLTLSPKPW--IPVLERIRDHVSGVT-GQTFNFVLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSR--------------RVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 257
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB3_RAT (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18 Identity = 67/214 (31.31%), Postives = 96/214 (44.86%), Query Frame = 1 Query: 106 SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDILDIV------LKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 729 S V +P + ++++ + L +PW + + QPR T + G P+ YS P L ++ ++ G FNSLL N Y+ D V WH+DDE GS P IAS+SFG R F ++ KP D +R+K L HG++L+M G TQ DW H VP+ + R+NLTFR V Sbjct: 88 SRVCLYPGFVDLKEADWILERLCQDVPWKQRMGIREDITYPQPRLTAWY-----------GELPYTYSRVTMEPNPHWLPVLWTLKSRIEENTGHTFNSLLCNFYRDEKDSVDWHSDDEPSLGSCPVIASLSFGATRTFEMRKKP----PPEENGDYTYVERVK---------IPLDHGTLLIMEGATQADWQHRVPKEYHSRERRVNLTFRTV 277
BLAST of CX069554 vs. ExPASy Swiss-Prot
Match: ALKB3_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus GN=Alkbh3 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.512e-18 Identity = 66/214 (30.84%), Postives = 95/214 (44.39%), Query Frame = 1 Query: 106 SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDILDIV------LKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSKSYQDRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 729 S V +P + ++++ + L +PW + + QPR T + G P+ YS P L ++ ++ FNSLL N Y+ D V WH+DDE GS P IAS+SFG R F ++ KP D +R+K L HG++L+M G TQ DW H VP+ + R+NLTFR V Sbjct: 88 SRVCLYPGFVDLKEADWILEQLCKDVPWKQRMGIREDVTYPQPRLTAWY-----------GELPYTYSRITMEPNPHWLPVLWTLKSRIEENTSHTFNSLLCNFYRDEKDSVDWHSDDEPSLGSCPVIASLSFGATRTFEMRKKP----PPEENGDYTYVERVK---------IPLDHGTLLIMEGATQADWQHRVPKEYHSRQPRVNLTFRTV 277 The following BLAST results are available for this feature:
BLAST of CX069554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069554 ID=CX069554; Name=CX069554; organism=Citrus sinensis; type=EST; length=733bpback to top |