CX069551

Overview
NameCX069551
Unique NameCX069551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069551 vs. ExPASy Swiss-Prot
Match: PAP4_ARATH (Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.754e-52
Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = -1 
Query:  584 ESFKEELXQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKSNLLNGKWEXXXXXXXXXXXTKRPKFLRPNGKIYQAINIDTLRAQNIETWPFFN 883
            +  K+EL +AI+PL+RGA ASP+DQ R+DQ+ARK+EAVN  KEPLKS+L+NGKWE            K+P+FLR     YQ+IN+DTL+ QN+ETWPF+N
Sbjct:   72 KQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITN-YQSINVDTLKVQNMETWPFYN 170

HSP 2 Score: 105.145 bits (261), Expect = 3.754e-52
Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = -3 
Query:  255 TANLVPLNSKRVAVKFDYFRIAGLIPIKSPGSGRGQLEITYLDEELRISRGNRGNLFILKMVDPSYRVPL 464
            T ++ PLNSK+VAVK   F+I G IPIK+P S RG+LEITY+DEELR+SRG++GNLFILKM DP+YR+PL
Sbjct:  173 TGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILKMFDPTYRIPL 242
[Close]
BLAST of CX069551 vs. ExPASy Swiss-Prot
Match: PAP5_ARATH (Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.339e-47
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = -1 
Query:  584 ESFKEELXQAIKPLDRGAEASPEDQARVDQIARKLEAVNDIKEPLKSNLLNGKWEXXXXXXXXXXXTKRPKFLRPNGKIYQAINIDTLRAQNIETWPFFN 883
            +  K EL +AI+PL+RGA ASP+DQ  +DQ+ARK+EAVN  KEPLKS+L+NGKWE            K+P+FLR     YQ IN+DTL+ Q +ETWPF+N
Sbjct:   63 KQLKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSLTN-YQCINMDTLKVQRMETWPFYN 161

HSP 2 Score: 95.1301 bits (235), Expect = 3.339e-47
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = -3 
Query:  255 TANLVPLNSKRVAVKFDYFRIAGLIPIKSP-GSGRGQLEITYLDEELRISRGNRGNLFILKMVDPSYRVPL 464
            T +L PLNSK VAVK   F+I G IP+K+P G+ RG+LEITY+DEELRISRG    LFILKM DP+YR+PL
Sbjct:  164 TGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELRISRGKGNLLFILKMFDPTYRIPL 234
The following BLAST results are available for this feature:
BLAST of CX069551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PAP4_ARATH3.754e-5257.00Probable plastid-lipid-associated protein 4, chlor... [more]
PAP5_ARATH3.339e-4755.00Probable plastid-lipid-associated protein 5, chlor... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_11C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11C04-F7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069551 ID=CX069551; Name=CX069551; organism=Citrus sinensis; type=EST; length=883bp
CTTTTTTTTTACTGTACTATACAAATCATATCATTCATGGCATGGATTAC
AAAAGTTATAAATTAGAAGTTAAACAAAGTACTCACACAAACTGTGTGCT
AGCTACAAAGCAGAGTAAGTATATTTTCAGTTTCCTCGGCCTATTAGCAG
CTAATTGATTGAGCAGATTTGATATCAACTCTGGCAATCTGAAAATTTAC
TTATGTGCGCTTCAATGATCCCTTTTTTTGCTAAGGGTCGCTGAGGCGGC
GTCAGAGAGGAACTCTATAGGACGGATCCACCATTTTCAAAATGAACAGA
TTCCCTCTATTGCCTCTTGAGATTCTTAACTCCTCGTCCAAGTATGTAAT
TTCCAATTGTCCACGCCCGCTACCAGGTGACTTAATTGGTATCAGGCCTG
CAATTCTGAAATAGTCAAATTTAACAGCCACTCTTTTAGAATTTAGAGGT
ACCAAGTTCGCTGTGGCCTCACATTGGATAGCAATGGAATTGCTTGTTGG
CAGAATCAAAGGGACTAGATGGAGAAAAAGAAAGATTTAAACATATACCA
GTCCGTTTCATCTTTTTAGCACTACTCTGTCTGATTAAAAAATGGCCAAG
TTTCTATATTTTGAGCTCTCAATGTGTCGATATTTATTGCCTGGTAGATT
TTTCCATTCGGTCGCAAGAATTTTGGTCTCTTTGTCTGCAGAAGTGATTG
AGATGTAGTATATAAAAGCTCCCATTTCCCATTCAGTAAGTTAGACTTTA
GAGGTTCCTTTATATCATTCACTGCCTCAAGTTTGCGAGCAATCTGATCA
ACACGTGCTTGGTCCTCAGGAGAGGCCTCGGCGCCACGATCAAGAGGCTT
TATTGCCTGGNAAAGCTCCTCCTTGAAGCTCTC
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