CX069550

Overview
NameCX069550
Unique NameCX069550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1379 contig Csv1_Contig1379:48..475. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.532e-30
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 1
Query:   10 AKNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIV 423
            A+  +L G+LETE+E K SA  FH + + RPHH S  TPD + G ELHEG+WGK G+++ W Y HDG                N  TFKV+EG L+++Y SF  T+Q  PK GE   +A W ++YEK SE+V  P+ ++
Sbjct:    2 AEASSLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYEKISEEVAHPETLL 140          
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.203e-27
Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 1
Query:   13 KNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQ 414
            ++ +L G+LET++E K SA  FH + + RPHH S  TP  +QG ELHEG+WGK G+++ W Y HDG                N  TF+VIEG LL +Y SF +T+Q  PK G    +  W ++YEK  + V  P+
Sbjct:   16 ESSSLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKVAHPE 150          
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.737e-26
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 1
Query:   22 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIV 423
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++
Sbjct:   21 SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLL 155          

HSP 2 Score: 114.39 bits (285), Expect = 1.920e-25
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 1
Query:   22 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIV 423
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG+ G+++ W Y HD                 N  TF+VI+G L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++
Sbjct:  183 SLVGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYVHDREAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYEKISEEVAHPETLL 317          
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.052e-26
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 1
Query:   22 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIV 423
            +L G+LETE+E K SA  FH + + +PHH S  +P ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK S++V  P+ ++
Sbjct:    8 SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLEYEKISDEVAHPETLL 142          

HSP 2 Score: 113.235 bits (282), Expect = 4.277e-25
Identity = 52/130 (40.00%), Postives = 75/130 (57.69%), Query Frame = 1
Query:   37 LETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIV 423
            LETE+E K SA  FH + + +PHH S  TP ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W  +YEK +E+V  P+ ++
Sbjct:  169 LETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKINEEVAHPETLL 298          
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.423e-12
Identity = 38/131 (29.01%), Postives = 62/131 (47.33%), Query Frame = 1
Query:   19 MTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDP 411
            M  SG   TE+  K SA   +       H F +    H+QGV +H+GEW   G +  W Y  DG                 + TF+ +EGH++++   + V  Q I K     + + T+ +EK+++D+P+P
Sbjct:    1 MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSHGAIKIWNYTCDG-KPEVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITMIWEKQNDDMPEP 130          
BLAST of CX069550 vs. ExPASy Swiss-Prot
Match: ML168_ARATH (MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.692e-11
Identity = 40/127 (31.50%), Postives = 65/127 (51.18%), Query Frame = 1
Query:   25 LSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDV 402
            +  ++E ++E K +A  F  + S R  H S  T  +VQG +L EGEWG+ G+++ W    DG                N   ++V+EG L ++Y+ F  T++  PK G    + +W +KYE+  E V
Sbjct:    2 VEAEVEVDVEIKSTADKFF-MFSRRSQHASKATR-YVQGCDLLEGEWGEVGSILLWKLTVDGEPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYERIDEKV 126          
The following BLAST results are available for this feature:
BLAST of CX069550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MLP43_ARATH7.532e-3044.60MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP... [more]
MLP31_ARATH1.203e-2742.22MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP... [more]
MLP28_ARATH1.737e-2640.00MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP... [more]
MLP34_ARATH5.052e-2639.26MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP... [more]
ML328_ARATH5.423e-1229.01MLP-like protein 328 OS=Arabidopsis thaliana GN=ML... [more]
ML168_ARATH2.692e-1131.50MLP-like protein 168 OS=Arabidopsis thaliana GN=ML... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_11C03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11C03-F5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069550 ID=CX069550; Name=CX069550; organism=Citrus sinensis; type=EST; length=428bp
TTTTAATCCGCTAAAAACATGACCCTATCTGGTCAGTTGGAGACTGAATT
AGAGGCCAAGGTTTCGGCTAGTATTTTTCATGATGTGCTTAGCTGCAGGC
CACACCATTTCTCCAATATGACTCCTGATCATGTACAAGGTGTTGAACTG
CACGAAGGTGAATGGGGAAAACCAGGCACTGTCATTACCTGGACTTATAA
GCATGATGGGGTTACAGAAATTGCCAAGGAGATAATTGAAGAAATAGATG
ACGAAAAGAACTCGACAACTTTTAAAGTAATTGAAGGGCATCTACTGGAC
AAGTACAGCAGCTTCTATGTTACCGTTCAAGCCATTCCGAAGGGTGAACA
TAGTTGCTTGGCTCGTTGGACTATCAAGTATGAGAAGAAGAGCGAGGACG
TGCCTGATCCCCAAGGAATTGTAAATTT
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