DR403905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_ARATH (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana GN=RPL11 PE=1 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 5.323e-73 Identity = 142/176 (80.68%), Postives = 150/176 (85.23%), Query Frame = 1 Query: 160 KPSPLLSSTPRFLTVIAMAPPXXXXXXXXXXXXXXXXXXXEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLGTKKK 687 K SPLLSSTPRFLTVIAMAPP EAGKATPAPPVGPALG+KGVNIMAFCKDYNARTADKAGY+IPVEITV+DD+SFTFILKTPPASVLLLKAAGVEKGSKDP+Q KVG ITI+QLR IA EKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+L KKK Sbjct: 45 KQSPLLSSTPRFLTVIAMAPPKPGGKAKKVVGVIKLAL--EAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKK 218
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_SPIOL (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea GN=rpl11 PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 6.303e-66 Identity = 134/201 (66.67%), Postives = 155/201 (77.11%), Query Frame = 1 Query: 91 LFPSAXXXXXXXXXXXPFYDNRVKPSPLLSSTPRFLTVIAMAPPXXXXXXXXXXXXXXXXXXXEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLGTKKKEL 693 L PS+ F ++++ SP S++ R L+++AMAP EAGKATPAPPVGPALG+KGVNIMAFCKDYNARTADK G+VIPVEITV+DD+SFTFILKTPPASVLLLKA+G EKGSKDP+ +KVGKITI+QLR IATEKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+L KKKE+ Sbjct: 27 LTPSSLSLSSNPRNSLQFLNSKLFLSPP-STSHRRLSIVAMAPKPGKAKKVIGVIKLAL----EAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGFVIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEV 222
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CYAP4 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplK PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47 Identity = 91/125 (72.80%), Postives = 107/125 (85.60%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKA PAPP+GPALG GVNIM FCK+YNARTAD+AG VIPVEI+VY+DRSFTFILKTPPASVL+ KAAG+E+GS +P ++KVGKIT QLR IA KLPDLN +++AMRI+AGTA NMG+ I Sbjct: 15 AGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVYEDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDVDAAMRIVAGTARNMGVTI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_GUITH (50S ribosomal protein L11, chloroplastic OS=Guillardia theta GN=rpl11 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.842e-47 Identity = 91/126 (72.22%), Postives = 108/126 (85.71%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 EAGKATPAPPVGPALG +GVNI+ FCKDYNARTADKAG +IPVEITVY+D+S+TF+LKTPPASVLL KAAGV+KGS +PK+ +VG +T +Q+ IA KLPDLN +ESA+RII GTA NMGI + Sbjct: 14 EAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVYEDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRLESAIRIIEGTAKNMGIGV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_SYNR3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain RCC307) GN=rplK PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47 Identity = 91/126 (72.22%), Postives = 106/126 (84.13%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL++KAAG+EKGS + + VG IT QL IA KLPDLNC+S+ESAMRII GTA NMG+ + Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLIVKAAGIEKGSGESAKGSVGSITRAQLEEIANTKLPDLNCSSVESAMRIIEGTARNMGVAV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_PROMM (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplK PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47 Identity = 93/126 (73.81%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS + KVG ++ QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGLVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGESAHGKVGSLSRSQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVSI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_PROM5 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplK PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47 Identity = 92/126 (73.02%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS + + VG I+ QL IA KLPDLNCTSIESAM++I GTA NMGI I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGESSKGSVGNISKSQLEEIAKTKLPDLNCTSIESAMKVIEGTARNMGISI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THEEB (50S ribosomal protein L11 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplK PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.118e-46 Identity = 89/126 (70.63%), Postives = 106/126 (84.13%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPP+GPALG GVNIM FCK+YNARTAD+ G V+PVEI+VY+DRSFTF+LKTPPASVL+ KAAG+EKGS +P ++KVG IT QLR IA +K+PDLN IE+AMRII GTA NMG+ I Sbjct: 14 QAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQVGMVVPVEISVYEDRSFTFVLKTPPASVLIQKAAGIEKGSGEPNKKKVGSITRAQLREIAEKKMPDLNANDIEAAMRIIEGTARNMGVTI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_SYNS3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9311) GN=rplK PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.118e-46 Identity = 91/126 (72.22%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNART DKAGYVIPVEI+V++DRSFTFI KTPPASVL+ KAAG++KGS + + VG I QL IA KLPDLNCTS+ESAMR+I GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGYVIPVEISVFEDRSFTFITKTPPASVLITKAAGIQKGSGESAKGSVGSINRSQLEEIAKTKLPDLNCTSVESAMRVIEGTARNMGVAI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_SYNPW (50S ribosomal protein L11 OS=Synechococcus sp. (strain WH7803) GN=rplK PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.118e-46 Identity = 93/126 (73.81%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS + + VG I QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGESAKGSVGSIKRSQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVAI 139 The following BLAST results are available for this feature:
BLAST of DR403905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403905 ID=DR403905; Name=DR403905; organism=Citrus sinensis; type=EST; length=766bpback to top |