DR403899

Overview
NameDR403899
Unique NameDR403899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2173 contig Csv1_Contig2173:49..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 6.509e-80
Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 3
Query:   66 MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKPD GK+KG
Sbjct:    1 MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKG 158          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.315e-77
Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 3
Query:   72 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK 536
            +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP  GK+K
Sbjct:    2 ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMK 156          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.024e-77
Identity = 133/155 (85.81%), Postives = 143/155 (92.26%), Query Frame = 3
Query:   72 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK 536
            +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+ GK+K
Sbjct:    2 ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMK 156          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 3.949e-77
Identity = 129/156 (82.69%), Postives = 144/156 (92.31%), Query Frame = 3
Query:   72 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDD YKACERF+ LGVEF KKP+ GK+KG
Sbjct:    2 AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKG 157          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.659e-75
Identity = 128/156 (82.05%), Postives = 143/156 (91.67%), Query Frame = 3
Query:   72 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            +SE K+SP+NNPGLH   DEAT GYF+QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRGFGHIG+TVDDVYKACERFE LGVEF KKP  GK+KG
Sbjct:    2 ASESKDSPSNNPGLHATPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKG 157          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_RAT (Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 7.499e-52
Identity = 92/138 (66.67%), Postives = 110/138 (79.71%), Query Frame = 3
Query:  126 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKPD GK+KG
Sbjct:   24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKG 160          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_MOUSE (Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 1.279e-51
Identity = 92/138 (66.67%), Postives = 110/138 (79.71%), Query Frame = 3
Query:  126 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GK+KG
Sbjct:   24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG 160          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_MACFA (Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 1.729e-48
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 3
Query:  126 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKPD GK+KG
Sbjct:   24 DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDDGKMKG 160          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_HUMAN (Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4)

HSP 1 Score: 191.045 bits (484), Expect = 2.949e-48
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 3
Query:  126 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKG 539
            D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GK+KG
Sbjct:   24 DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG 160          
BLAST of DR403899 vs. ExPASy Swiss-Prot
Match: LGUL_PSEAE (Lactoylglutathione lyase OS=Pseudomonas aeruginosa GN=gloA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.218e-37
Identity = 78/141 (55.32%), Postives = 91/141 (64.54%), Query Frame = 3
Query:  105 PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG 527
            PG+    D  T  Y    TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D+  ACERFE LGV F K  D G
Sbjct:    9 PGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG 147          
The following BLAST results are available for this feature:
BLAST of DR403899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
LGUL_CICAR6.509e-8086.71Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_BRAJU2.315e-7785.16Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH3.024e-7785.81Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_SOYBN3.949e-7782.69Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_SOLLC1.659e-7582.05Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
LGUL_RAT7.499e-5266.67Lactoylglutathione lyase OS=Rattus norvegicus GN=G... [more]
LGUL_MOUSE1.279e-5166.67Lactoylglutathione lyase OS=Mus musculus GN=Glo1 P... [more]
LGUL_MACFA1.729e-4862.32Lactoylglutathione lyase OS=Macaca fascicularis GN... [more]
LGUL_HUMAN2.949e-4862.32Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 P... [more]
LGUL_PSEAE5.218e-3755.32Lactoylglutathione lyase OS=Pseudomonas aeruginosa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246J21 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246J21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403899 ID=DR403899; Name=DR403899; organism=Citrus sinensis; type=EST; length=540bp
GGGGAGCCCCACTAAAACTACTACTTAGTTGGTTCAAGGCTTCGAATCNN
NNNCGGTTGCTTTCAATGGCTTCTTCGGAGCCCAAAGAATCGCCCGCTAA
CAATCCGGGTCTTCACACCGCCCGTGATGAAGCTACCAACGGATACTTCA
TGCAACAAACGATGTTTCGAATTAAGGACCCCAAAGTTAGTCTTGATTTC
TATTCTCGTGTGTTGGGCATGTCGCTACTAAAGAGGTTGGATTTTCCAGA
AATGAAATTTAGCCTATACTTTTTGGGCTATGAGGATACTGCATCAGCTC
CAGCTGACCCTGTTGATAGAACTGTTTGGACTTTTGGGAAGCCAGCTACA
ATTGAGCTGACTCATAACTGGGGAACTGAAAGTGATCCCGACTTCAAAGG
TTATCACAATGGGAATTCAGAACCCCGTGGCTTTGGGCACATCGGCATCA
CTGTTGATGATGTATATAAGGCATGTGAGAGGTTTGAACGTCTAGGAGTG
GAATTTGCAAAGAAACCAGATGGTGGAAAATTGAAAGGCG
back to top