DR403894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 246 RD+VN++ CEG +RVERH LGKWRSRF MAGFTPY LSPLV + ++ +L++Y YR+EE DGALYLGW +R + S AWK Sbjct: 409 RDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.815e-25 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 246 RD+VN++ CEG ER+ERH LGKW+SRF MAGF PY LS +++ +R +L+DY + Y +EE DGALYLGW +R + +S AWK Sbjct: 332 RDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.514e-23 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 246 R++VN++ CEG+ER ERH LGKWRSRF MAGF PY LS V ++ +L+ Y Y +EE DGALYLGW+N+ + TS AW+ Sbjct: 516 REVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.525e-20 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAW 243 R+IVN++ CEG ER ER+ GKW++R MAGF P LS LV +R +L+ Y NY++ E DGALYLGW++R + SSAW Sbjct: 463 REIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.525e-20 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAW 243 +DIVN++ CEG +RVERH LGKW+SR MAGF PY LS V + +R +L Y Y ++E DGA+ LGWR+R + ++SAW Sbjct: 490 KDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.077e-16 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLK-DYDSNYRVEENDGALYLGWRNRAMATSSAWK 246 RDIVN++ CEG ER+ER+ GKWR+R MMAGF P +S VTN +++++K Y + Y+++E G L+ W +++ +SAW+ Sbjct: 511 RDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS--NYRVEENDGALYLGWRNRAMATSSAWK 246 + I N++ CEG +RVERH L +WR+R AGF P L +L + S YRVEEN+G+L LGW R + +SAWK Sbjct: 487 KQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWK 570
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN--YRVEENDGALYLGWRNRAMATSSAWK 246 R I+N++ EG +RVERH +WR R AGF P L +L Y + YRVEENDG L +GW+ R + T+SAWK Sbjct: 462 RQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13 Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 246 R I N++ CEG ER ERH LG+WRSR +GF P L +L + YRVEE DG L LGW R + +SAW+ Sbjct: 540 RQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR 623
BLAST of DR403894 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 1 RDIVNMLFCEGIERVERHXXLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 246 R I+N++ CEG +RVERH L +WR+RF + GF P + +L Y Y VEEN+G L LGW+ R + +SAW+ Sbjct: 423 RQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506 The following BLAST results are available for this feature:
BLAST of DR403894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403894 ID=DR403894; Name=DR403894; organism=Citrus sinensis; type=EST; length=537bpback to top |