CX069459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069459 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.748e-37 Identity = 88/182 (48.35%), Postives = 112/182 (61.54%), Query Frame = 1 Query: 1 LTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPSSAFAQPQNIMSGGSASNGSKLS--QRIASLVXXXXXXXXXXXXXXIRYSCRKEVAQRMQRKNGQFTSSKA-------TFNIXXXXXXXXXXXXXXXXVSRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTK 519 LT++++G+VYVF V+P KVQA+LLLLG ++P T+P++ + QN G + +LS QR+ASL+ IRY+ RKEVA RMQRK GQFTS+K+ T + +C+HCG SEK TP MRRGP GPRTLCNACGLMWANKGTLRDL+K Sbjct: 80 LTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSK 261
BLAST of CX069459 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.217e-35 Identity = 90/207 (43.48%), Postives = 113/207 (54.59%), Query Frame = 1 Query: 1 LTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPSSAFAQPQN--IMSGGSASNGSKLSQRIASLVXXXXXXXXXXXXXXIRYSCRKEVAQRMQRKNGQFTSSKATFNIXXXXXXXXXXXXXXXXVSR-------ICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKG----GRNICFEQHE---LETSSDI 573 LT++++G+VYVF +V P KVQA+LLLLG ++P P + QN + S + QR+ASLV IRY+ RKEVA RMQR GQFTS+K+ + S C+HCGI EK TP MRRGPAGPRTLCNACGLMWANKG RDL+K +N+ ++E LET I Sbjct: 84 LTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQI 290
BLAST of CX069459 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.288e-29 Identity = 79/174 (45.40%), Postives = 91/174 (52.30%), Query Frame = 1 Query: 1 LTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPS-SAFAQPQNIMSGGSASNGSKLSQRIASLVXXXXXXXXXXXXXXIRYSCRKEVAQRMQRKNGQFTSSKATFNIXXXXXXXXXXXXXXXXVSRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTK 519 LT+++ G+VYVF AV KV A+L LLG + P AQ QN M + L QR SL +RY R+EVA RM R GQFTSSK T C HCGIS K TP MRRGP+GPRTLCNACGL WAN+GTLRDL+K Sbjct: 84 LTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEIS-CTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSK 256 The following BLAST results are available for this feature:
BLAST of CX069459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069459 ID=CX069459; Name=CX069459; organism=Citrus sinensis; type=EST; length=804bpback to top |