CX069455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_OENBE (ATP synthase subunit a OS=Oenothera bertiana GN=ATP6 PE=2 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 1.308e-68 Identity = 133/154 (86.36%), Postives = 135/154 (87.66%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLS LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMN++FYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH Sbjct: 128 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 281
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_TOBAC (ATP synthase subunit a OS=Nicotiana tabacum GN=ATP6 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 9.372e-67 Identity = 133/167 (79.64%), Postives = 137/167 (82.04%), Query Frame = -3 Query: 386 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH*SGYLFIIEQKRV 886 LFCN QGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQ+NGLHFLS LI YCFRALS GIRLFANMMAGHS VKILSGFAWTMLCMN++ YFIGDLGPLFIVLALTGLELGVAI QA+V TILICIYLNDAINLH S FIIEQKRV Sbjct: 229 LFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPAGVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFIGDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAINLHQSASFFIIEQKRV 395
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP62_ARATH (ATP synthase subunit a-2 OS=Arabidopsis thaliana GN=ATP6-2 PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 3.561e-66 Identity = 130/154 (84.42%), Postives = 132/154 (85.71%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LFCNLQGMIPYSFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMN+IFYFIG LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH Sbjct: 196 LFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 349
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP61_ARATH (ATP synthase subunit a-1 OS=Arabidopsis thaliana GN=ATP6-1 PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 3.561e-66 Identity = 130/154 (84.42%), Postives = 132/154 (85.71%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LFCNLQGMIPYSFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMN+IFYFIG LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH Sbjct: 232 LFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 385
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_BRANA (ATP synthase subunit a OS=Brassica napus GN=ATP6 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.651e-66 Identity = 130/154 (84.42%), Postives = 131/154 (85.06%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LFCNLQGMIPYSFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMN IFYFIG LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH Sbjct: 107 LFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNEIFYFIGALGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 260
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_VICFA (ATP synthase subunit a OS=Vicia faba GN=ATP6 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64 Identity = 129/161 (80.12%), Postives = 133/161 (82.61%), Query Frame = -3 Query: 404 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH*SGYLFI 886 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLS LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMN++ YFIGDLGPLFIVLALTG ELGVAI QA+V TI ICIYLNDA NLH + LFI Sbjct: 129 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLLYFIGDLGPLFIVLALTGPELGVAISQAHVSTISICIYLNDATNLHQTCLLFI 289
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_WHEAT (ATP synthase subunit a OS=Triticum aestivum GN=ATP6 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60 Identity = 122/154 (79.22%), Postives = 126/154 (81.82%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LF N QGMIP+SFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTML +NNIFYFIGDLGPLFIVLALTGLELGVAI QA+V TI ICIYLNDA NLH Sbjct: 226 LFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFIGDLGPLFIVLALTGLELGVAISQAHVSTISICIYLNDATNLH 379
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_TRITI (ATP synthase subunit a OS=Triticum timopheevi GN=ATP6 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60 Identity = 122/154 (79.22%), Postives = 126/154 (81.82%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LF N QGMIP+SFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTML +NNIFYFIGDLGPLFIVLALTGLELGVAI QA+V TI ICIYLNDA NLH Sbjct: 226 LFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFIGDLGPLFIVLALTGLELGVAISQAHVSTISICIYLNDATNLH 379
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_MARPO (ATP synthase subunit a OS=Marchantia polymorpha GN=ATP6 PE=3 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58 Identity = 118/154 (76.62%), Postives = 123/154 (79.87%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LFCNL GMIPYSFTVTSHF+ITLGLSFS+FIGITIVGFQ +GLHF S LISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTML M I Y +G L P FIV ALTGLELGVAILQAYVFTIL+CIYLNDAINLH Sbjct: 100 LFCNLIGMIPYSFTVTSHFIITLGLSFSLFIGITIVGFQTHGLHFFSILLPQGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLSMGGILY-LGQLAPFFIVFALTGLELGVAILQAYVFTILLCIYLNDAINLH 252
BLAST of CX069455 vs. ExPASy Swiss-Prot
Match: ATP6_MAIZE (ATP synthase subunit a OS=Zea mays GN=ATP6 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.039e-57 Identity = 118/154 (76.62%), Postives = 124/154 (80.52%), Query Frame = -3 Query: 425 LFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSXXXXXXXXXXXXXXXXXXXLISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNNIFYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH 886 LF N QGMIP+SFTVTSHFLITL LSFSIFIGITIVGFQR+GLHF S LIS+CFRALS GIRLFANMMAGHS VKILSGFAWTML +NNIFYF+GDLGPLFIVLALTGLELGVAI QA+V TI ICIYLNDA NLH Sbjct: 123 LFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELISHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLFLNNIFYFLGDLGPLFIVLALTGLELGVAISQAHVSTISICIYLNDATNLH 276 The following BLAST results are available for this feature:
BLAST of CX069455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069455 ID=CX069455; Name=CX069455; organism=Citrus sinensis; type=EST; length=888bpback to top |