CX069450

Overview
NameCX069450
Unique NameCX069450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.215e-88
Identity = 134/192 (69.79%), Postives = 152/192 (79.17%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 578
            IHTDLKPEN+LLVSS+Y+K+P+YK S    +D  Y KR+PKSSAIKVIDFGSTTYER DQ YIVSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMERVLGP PQ MLK+V+                           RH+EKYVRRGRLDWP+GA SR+S+K+V+KLPRLQ
Sbjct:  220 IHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVD---------------------------RHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQ 382          

HSP 2 Score: 78.5666 bits (192), Expect = 1.215e-88
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 1
Query:  664 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 795
            QNLIMQHVDHSAG+L +++QGLLR+DP++R+TAREALRHPFF R
Sbjct:  382 QNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRHPFFAR 425          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 5.016e-87
Identity = 130/192 (67.71%), Postives = 146/192 (76.04%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRL 575
            IHTDLKPEN+LLVSSEYIK+PDYK  S   KD SYFK +PKSSAIK+IDFGSTT+E  D NYIVSTRHYRAPEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMERVLGPLP HM+ R +                           R +EKY RRG +LDWPEGA SR+S+K+V KLPRL
Sbjct:  237 IHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRAD---------------------------RRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRL 401          

HSP 2 Score: 79.7221 bits (195), Expect = 5.016e-87
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 1
Query:  667 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDQ 801
            NLIMQHVDHSAGDL  LLQGLLRYDPT+R  AREAL HPFFTR +
Sbjct:  403 NLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFFTRSR 447          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 5.419e-65
Identity = 112/193 (58.03%), Postives = 138/193 (71.50%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQ 578
            +HTDLKPEN+LLVSSE +K+PD K S+    + ++F+ +PKSSAIK+IDFGST  +    + IV TRHYR+PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHLAMMER LGPLP+HM ++                            SR AEKY RRG RL+WPEGA SRESI++V +L RL+
Sbjct:  193 VHTDLKPENILLVSSENVKLPDNKRSA---ANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKA---------------------------SRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLK 355          

HSP 2 Score: 51.6026 bits (122), Expect = 5.419e-65
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 1
Query:  664 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 789
            ++++ +HVD++      LL GLL YDP++RLTA EAL HPFF
Sbjct:  355 KDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.510e-39
Identity = 77/186 (41.40%), Postives = 104/186 (55.91%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRGRLDWPEGAASRESIKSVMK 563
            HTDLKPEN+L V S+Y    ++K +           R  K++ +++IDFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G  LFQTH+N EHLAMMER+LG +P  M +                             S+   KY   G+LDW E +++   ++   K
Sbjct:  603 HTDLKPENILFVDSDYTSHYNHKINREV--------RRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERILGQIPYRMARN------------------------HTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCK 756          

HSP 2 Score: 37.3502 bits (85), Expect = 2.510e-39
Identity = 18/51 (35.29%), Postives = 29/51 (56.86%), Query Frame = 1
Query:  649 IASFCQNLIMQHVDHSAG--DLTHLLQGLLRYDPTDRLTAREALRHPFFTR 795
            +   C+ L +  +  S    +L  L++ +L Y+P+ R+T  EAL HPFF R
Sbjct:  751 VRDHCKPLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.253e-37
Identity = 76/131 (58.02%), Postives = 100/131 (76.34%), Query Frame = 3
Query:    3 IHTDLKPENVLLVS--SEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR 389
            +HTDLKPENVLLVS  S  I++P Y++         Y +++  S  I++IDFGS T+E    + +VSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL TG+ALFQTHE+ EHL MME++LGP  ++M+ R
Sbjct:  485 VHTDLKPENVLLVSNASRTIRLP-YRN---------YSQKVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKILGPFDRNMISR 605          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.020e-37
Identity = 72/128 (56.25%), Postives = 96/128 (75.00%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR 389
            HTDLKPEN+L V S+Y+     K +S   +D    +R  K++ IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER+LGP+PQHM+++
Sbjct:  284 HTDLKPENILFVKSDYV----VKYNSKMKRD----ERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPQHMIQK 403          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.020e-37
Identity = 80/186 (43.01%), Postives = 108/186 (58.06%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRGRLDWPEGAASRESIKSVMK 563
            HTDLKPEN+L V+S      DY+ + +  K     +R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER+LGP+P  M+++                                +KY  RGRLDW E  ++   ++   K
Sbjct:  288 HTDLKPENILFVNS------DYELTYNLEKKRD--ERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKT-----------------------------RKQKYFYRGRLDWDENTSAGRYVRENCK 436          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37
Identity = 80/186 (43.01%), Postives = 108/186 (58.06%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE*VIFSKVF*VLTDLNPLIVFIAMNFLSRHAEKYVRRGRLDWPEGAASRESIKSVMK 563
            HTDLKPEN+L V+S      DY+ + +  K     +R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER+LGP+P  M+++                                +KY  RGRLDW E  ++   ++   K
Sbjct:  287 HTDLKPENILFVNS------DYELTYNLEKKRD--ERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPVPSRMIRKT-----------------------------RKQKYFYRGRLDWDENTSAGRYVRENCK 435          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.491e-36
Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR 389
            HTDLKPEN+L V S+Y+     K +S   +D    +R  K++ IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +FQTH++ EHLAMMER+LGP+P HM+++
Sbjct:  284 HTDLKPENILFVKSDYV----VKYNSKMKRD----ERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQK 403          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.785e-34
Identity = 69/128 (53.91%), Postives = 92/128 (71.88%), Query Frame = 3
Query:    6 HTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR 389
            HTDLKPEN+L V S+Y       + ++ PK     +R   +  IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER+LGPLP+HM+++
Sbjct:  285 HTDLKPENILFVKSDY-------TEAYNPK-MKRDERTIVNPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSREHLAMMERILGPLPKHMIQK 404          
The following BLAST results are available for this feature:
BLAST of CX069450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
AFC2_ARATH1.215e-8869.79Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC1_ARATH5.016e-8767.71Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC3_ARATH5.419e-6558.03Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
DOA_DROME2.510e-3941.40Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
LKH1_SCHPO2.253e-3758.02Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK4_HUMAN5.020e-3756.25Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK2_HUMAN5.020e-3743.01Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
CLK2_MOUSE6.556e-3743.01Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
CLK4_MOUSE2.491e-3655.47Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK1_MOUSE1.785e-3453.91Dual specificity protein kinase CLK1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10E05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10E05-I10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069450 ID=CX069450; Name=CX069450; organism=Citrus sinensis; type=EST; length=802bp
TGATACATACTGACTTAAAGCCTGAGAACGTTCTACTTGTTTCTTCCGAG
TATATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTC
TTCCTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATT
TTGGCAGCACAACTTATGAGCGCCCAGATCAGAACTACATTGTATCCACC
CGACATTATCGTGCGCCGGAGGTCATCCTTGGACTTGGGTGGACTTACCC
ATGTGATATATGGAGTGTTGGTTGTATCTTAGTGGAGTTATGCACGGGTG
AGGCATTATTCCAAACTCATGAGAACTTGGAGCACCTTGCGATGATGGAA
CGGGTGCTTGGTCCCTTGCCTCAACATATGCTGAAGAGAGTAGAGTGAGT
GATCTTCTCCAAAGTTTTTTAAGTGCTCACTGATCTCAACCCACTGATAG
TATTTATCGCCATGAATTTTCTCAGCCGACATGCAGAGAAGTATGTTAGA
AGGGGTAGGTTGGACTGGCCAGAAGGTGCAGCCTCTAGGGAAAGTATTAA
ATCTGTGATGAAGCTACCTCGTCTTCAGGTTCCTTTTTTTTTATGGTTCT
TTTGTGGAATTTAAGGGTTATTGTCTTGCTTTTAGGTGTACTGACTGCAT
TGCCTCATTTTGCCAGAACCTAATAATGCAGCACGTTGACCATTCAGCTG
GTGATCTTACACATTTATTGCAAGGACTGCTTAGGTATGATCCTACGGAC
AGGCTAACTGCGCGTGAAGCTCTTAGGCATCCCTTTTTTACCAGAGATCA
GC
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