CX069447

Overview
NameCX069447
Unique NameCX069447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: INVS_DANRE (Inversin OS=Danio rerio GN=invs PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  461 IGYKRKLLNLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAML 799
            +G++  +L LI  GA+++  D  G +ALH  A  GN+ +CE+L+E G   +  D+AG+TPL  A          LLI+H AD +++DKEG T L  + N+     +DA K +L
Sbjct:  393 MGHRDVILTLIKGGARVDLVDIDGHSALHWAALGGNAEVCEVLMENGISPNLQDQAGRTPLQCAAYAGYINCMALLIQHDADPNIQDKEGRTALHWSCNNG---YLDAVKLLL 502          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis GN=RF_0381 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 2
Query:  488 LISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVL 742
            L+ RGA +N+K   G TALH    + N AL  LL+  GA+V+A + +G+TPL  AVI ++ ++  LLI +GAD++ ++  G TVL
Sbjct: 1049 LMVRGADVNAKTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSGETPLHYAVIFNSLDLVSLLIHNGADINTKNNSGETVL 1133          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: TNKS1_HUMAN (Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:  488 LISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRA-SNDFRPILIDA 784
            L+  GA +N++DK G   LH  AS G+  +  LLI+    V+ATDK   TPL  A      ++  LL+ HGAD  ++++EG T L  A ++D R +LIDA
Sbjct:  856 LLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTMKNQEGQTPLDLATADDIRALLIDA 955          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  464 GYKRKLLNLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 790
            G    LL  I  G  +N++D  G T LH     G+  + ++L+++ A+V+A D  GQTPL  AV+C  + +A  L++  A+   +D++G + L    +D+ P + D+AK
Sbjct:  244 GEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLDLCESDW-PWIRDSAK 351          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: FANK1_BOVIN (Fibronectin type 3 and ankyrin repeat domains protein 1 OS=Bos taurus GN=FANK1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  500 GAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQ-TPLMN-AVICHNKEVALLLIRHGADVDVEDKEGYTVL 742
            GA  +++D  GCTALH  A  G+  + E +I +G EVDA D   + TPLM  + +  N+EVA LLI  GADV+V+DK+G T L
Sbjct:  200 GASWDTRDLGGCTALHWAADGGHCNVIEWMIGDGCEVDAVDAGSRWTPLMRVSAVSGNQEVASLLIDAGADVNVKDKDGKTPL 282          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: Y580_RICFE (Putative ankyrin repeat protein RF_0580 OS=Rickettsia felis GN=RF_0580 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2
Query:  488 LISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRA 751
            L+ +GA INSKD  G +ALH           ELL+  GA+V+A D    T L N +  +N E A  L+++GADV++E+   +T L RA
Sbjct:  127 LLKKGADINSKDSFGASALHGTIYNNKLKAAELLLNHGADVNAKDNYEDTILHNIIGTNNIEAAKFLLQNGADVNIENNNNFTPLDRA 214          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: TANC1_RAT (Protein TANC1 OS=Rattus norvegicus GN=Tanc1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  488 LISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRA 751
            L+S+GA ++S DK G +AL      G+ A+ + L+EEGAE+D TDK G+TPL  A    + E  L L+  GA ++  D  G   L RA
Sbjct: 1154 LLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGAEIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHVDHSGMRPLDRA 1241          
BLAST of CX069447 vs. ExPASy Swiss-Prot
Match: TANC1_MOUSE (Protein TANC1 OS=Mus musculus GN=Tanc1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  488 LISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRA 751
            L+S+GA ++S DK G +AL      G+ A+ + L+EEGAE+D TDK G+TPL  A    + E  L L+  GA ++  D  G   L RA
Sbjct: 1161 LLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGAEIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHVDHSGMRPLDRA 1248          
The following BLAST results are available for this feature:
BLAST of CX069447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
INVS_DANRE9.021e-1338.05Inversin OS=Danio rerio GN=invs PE=2 SV=1[more]
Y381_RICFE9.974e-1243.53Putative ankyrin repeat protein RF_0381 OS=Rickett... [more]
TNKS1_HUMAN2.902e-1141.00Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2[more]
ACBP2_ARATH2.902e-1133.03Acyl-CoA-binding domain-containing protein 2 OS=Ar... [more]
FANK1_BOVIN6.465e-1148.19Fibronectin type 3 and ankyrin repeat domains prot... [more]
Y580_RICFE8.444e-1140.91Putative ankyrin repeat protein RF_0580 OS=Rickett... [more]
TANC1_RAT8.444e-1142.05Protein TANC1 OS=Rattus norvegicus GN=Tanc1 PE=1 S... [more]
TANC1_MOUSE8.444e-1142.05Protein TANC1 OS=Mus musculus GN=Tanc1 PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_10E04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10E04-I8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069447 ID=CX069447; Name=CX069447; organism=Citrus sinensis; type=EST; length=820bp
TTTGAAGTGCCAACAGCCCTTTGAATTCTCATCTCTTCAGGAAAGATTTT
TTCAGTACTGAATGTGACAGATCTTTGCAAGCTTAACCATGTCAAGAATA
TACCTTTAAGATCAACCTATTGGAATTGGTCATGGAGTTGATGCAAATCA
ATGCTGTTAGTTGGAAGCGTTGTTGCATTCCGCAAAGTATAGTAATTAAC
CCCTATAAATCATAGGCTCCTTTAACCAAATCTTTCTTCTCTTCTGAGAA
TCTTGGAAATCCATCCCTAACCAAAGCCTTCATAGGAAAGAAATGGCTAA
TCTCCATGAACAAATGGATATATATACCTGAAAAAGAATTCTAAACTAAT
CATCCAAGAGCAAGCCTGTGGCTCTTTCTGCTGCCTCCTTATCGTGGGAA
AGCTGTGAGTGAGGCTCAAACCATTGGCATACCAGTGAAATTCCAATTTC
TCCATCTTGAATAGGCTATAAAAGGAAACTACTAAATCTGATCTCACGTG
GTGCAAAAATTAACTCGAAGGACAAGGTTGGTTGCACAGCATTGCACCGG
GGAGCTAGTACAGGGAATTCAGCATTGTGTGAACTCTTAATTGAAGAAGG
AGCAGAGGTTGATGCTACTGATAAAGCCGGACAAACTCCTCTTATGAATG
CAGTGATTTGCCATAACAAAGAGGTTGCTCTTCTTCTAATAAGACATGGA
GCGGATGTTGATGTGGAAGACAAGGAAGGCTACACTGTGCTGGGTCGGGC
TTCAAATGATTTTAGACCCATACTGATTGATGCTGCCAAAGCTATGCTGG
AAGGATGAATTCTTAGTTTG
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