CX069443

Overview
NameCX069443
Unique NameCX069443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069443 vs. ExPASy Swiss-Prot
Match: M310_ARATH (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.959e-17
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = -1 
Query:  246 AVPAYAMSIFRIPQGLCDDIQKAVERFWWGIIRNL*KYLLGKVGKVVPG*-DQGGLGFRDLSSFNQALVAKQGWRILHNPDSFMAKVLKAKYSKHTDFMEAKLGS 557
            A+P YAMS FR+ + LC  +  A+  FWW    N  K       K+     D GGLGFRDL  FNQAL+AKQ +RI+H P + ++++L+++Y  H+  ME  +G+
Sbjct:    2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGT 106
The following BLAST results are available for this feature:
BLAST of CX069443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M310_ARATH1.959e-1741.90Uncharacterized mitochondrial protein AtMg00310 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_10E01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10E01-I2-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069443 ID=CX069443; Name=CX069443; organism=Citrus sinensis; type=EST; length=593bp
CTTTGGTAAAACATTGCTCAATCTTCTCTTCCTTCCACTGATTTTTGTCA
TCAATAAAATCAGCAACAACAGCCCCTTCCGTTAAATTTTGATGAGGGAC
ATAGCTTGAAAGTTCAGATCTCAGAATCCAATTACTGCTGGACACCGAAA
CACGGCTTCCATTACCAATTCTCCATCTTAGGCCTTGGTGAAGCACTTGT
CTCCCCATAATGTACTTCTCCATACAAAGGGGGGATTTGCCGATTTGACC
CCAATTTTGCCTCCATAAAGTCAGTATGTTTGGAGTACTTGGCTTTTAAT
ACTTTTGCCATAAAAGAATCAGGGTTATGTAGAATTCTCCACCCCTGCTT
AGCAACAAGAGCCTGATTGAAACTTGAAAGATCTCTAAATCCCAATCCAC
CCTGATCTTAGCCCGGCACAACCTTTCCCACCTTACCCAATAAATACTTC
TATAAGTTTCGGATGATCCCCCACCAAAACCTTTCTACTGCCTTTTGTAT
ATCGTCACAAAGCCCTTGAGGAATTCTAAAAATGCTCATCGCATAAGCCG
GCACAGCTTGTGCCACAACTTTGATGAGGATATCTTTTTCCCC
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