DR403840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45 Identity = 101/197 (51.27%), Postives = 132/197 (67.01%), Query Frame = 3 Query: 147 QQPHNSTFLLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 ++ +++FLLDALYC EE W+DE +V++ + + P +L +QDL W+D++L TL SKE L + + LS R EAV W+L+VNAHY F+ L A+LA+ YLD+F+ S+ LQRDKPWM QL +VACLSLAAKVEETQVPLLLD QVE+TK+VFEAKTIQRME+L+LST Sbjct: 10 REEQSNSFLLDALYCEEEKWDDEGE----EVEENSSL------------------SSSSSPFVVL-QQDLFWEDEDLVTLFSKEEEQGLSCL--DDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILST 181
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.236e-40 Identity = 95/199 (47.74%), Postives = 126/199 (63.32%), Query Frame = 3 Query: 144 QQQPHNSTF-LLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 +++ N+ F +LD L+C EE+ E C + + F F+N L + D+ W DDELSTL+SK+ P LY+ + + L R +A+DW+ KV +HY F +LTALLAVNY DRF+ S + Q DKPWM+QL A+ACLSLAAKVEE +VP LLD QVE+ ++VFEAKTIQRME+LVLST Sbjct: 6 EEESQNAPFCVLDGLFCEEESEFHEQVDLCDESVE--------------KFPFLNLG---------LSDHDMLWDDDELSTLISKQEPC-LYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLST 180
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.739e-39 Identity = 97/200 (48.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 144 QQQPHNSTF-LLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKE-VPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 ++ N F +LD LYC EE E +D DG L F F+ P+L W DDE+ +L+SKE N + + L R EA+DW+L+V +HY FT+LTA+LAVNY DRF+ S +LQ DKPWM+QL AVA LSLAAKVEE QVPLLLDLQVE+ +++FEAKTIQRME+L+LST Sbjct: 7 EEASQNGAFCVLDGLYCEEETGFVEDDLD----DDGDLDFLEKSDESVVKFQFL----------PLLDM--FLWDDDEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILST 190
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 2.102e-31 Identity = 73/141 (51.77%), Postives = 100/141 (70.92%), Query Frame = 3 Query: 330 VPMLHEQDLSWQDDELSTLLSKEV---PNRLY--NILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 +PM+ S +D + +L +E+ P Y +L + LS R++A+DW+LKV AHY F L L++NYLDRFL S++L +DK W AQL AV+CLSLA+K+EET VP ++DLQVED KFVFEAKTI+RME+LV++T Sbjct: 52 IPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLS-VRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTT 191
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30 Identity = 66/97 (68.04%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 447 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 R R +A+DW+ KV+++YSF LTA LAVNYLDRFL +QL K WM QL AVACLSLAAK+EET VP LDLQV + ++VFEAKTIQRME+LVLST Sbjct: 101 RVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLST 197
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.559e-26 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 357 SWQDDELSTLLSKE---VPNRLY-NILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 SW D ++ + E VP Y + +T + AR ++V W+LKV A+Y+F LTA LAVNY+DRFL++ +L W QL AVACLSLAAK+EE VP L D QV K++FEAKTI+RME+LVLS Sbjct: 46 SWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLS 175
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 55/95 (57.89%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 453 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 R +A+DW+ KV+++Y+F L+ LAVNYLDRFL SF L D+ WM QL +V+CLSLA K+EET VPL +DLQV D ++VFEA+ I+RME++V+ T Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKT 189
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25 Identity = 54/96 (56.25%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 447 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 R RSEA+ W+ +V +Y+F+++TA LAVNYLDRFL ++L + WM QL +VACLS+AAK+EET VP LDLQ+ + +F+FE +TI RME+LVL+ Sbjct: 108 RVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLT 203
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.117e-24 Identity = 60/97 (61.86%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 453 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFS--FQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 R A+DW+ KV A+YSF L A LAVNYLDRFL S F + D PWM QL VACLSLAAK+EET P LDLQV + ++VF+A+TI RMEI+VL+T Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTT 200
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 450 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 AR+E+V W+LKV + F LTA LAVNY+DRFL L + W QL AVACLSLAAK+EET VP LLDLQVE +++VFE +TI RME L+L+ Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILT 175 The following BLAST results are available for this feature:
BLAST of DR403840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403840 ID=DR403840; Name=DR403840; organism=Citrus sinensis; type=EST; length=738bpback to top |