CX069433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 301.982 bits (772), Expect = 2.783e-81 Identity = 144/201 (71.64%), Postives = 172/201 (85.57%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L K+SGR+L WQ++LGHCVLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YNY+A Sbjct: 695 LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 292.352 bits (747), Expect = 2.205e-78 Identity = 142/201 (70.65%), Postives = 167/201 (83.08%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L K+SGR+L WQ +LGH VLKAEF +GKKE VSLFQT+VL++FN+ SF++IK ATGIED ELRRTLQSLACGK RVL K PKG++VED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK+NP Y+Y+A Sbjct: 559 LGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.094e-77 Identity = 140/201 (69.65%), Postives = 167/201 (83.08%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L K+SGR+L WQ +LGH VLKA+F +GKKE VSLFQT+VL++FN+ SF++IK ATGIED ELRRTLQSLACGK RVL K PKG++VED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK++P Y+Y+A Sbjct: 559 LGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.102e-53 Identity = 118/236 (50.00%), Postives = 153/236 (64.83%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA---QKLSFQDIKDATGIEDKELRRTLQSLACGKVRVL-QK-------------------------------LPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 LSK++G+ L WQN+L +CVLKA F +GKKEL+VSLFQT++L LFND +LSF+DI+ TG+ EL++ L SL K +L QK K + +++ D+F+FN F++ L++IKVN+IQ++ETVEEN T E + DRQYQVDAAIVRIMKTRK L+H LLI+EL LKF KP DLKKRIE LI++EYL RD N IYNY+A Sbjct: 567 LSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.131e-43 Identity = 89/205 (43.41%), Postives = 136/205 (66.34%), Query Frame = -2 Query: 249 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA---QKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYL 848 LSK G+++ W SLGHC++KA FP G KEL++SLFQ VL+ FN+ + +S+QD+K +T + D +L RTLQSL+C ++R L +PK + D F NE FT LYR+K+N I +KE +EN+ E+V +DRQ+++ A+IVR+MK ++ + H L+ + +K P +D+K IE L+++EYLER+ N+ IY Y+ Sbjct: 531 LSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLEREDND--IYTYV 733
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.156e-41 Identity = 95/237 (40.08%), Postives = 140/237 (59.07%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQK-LPK---------------------------------GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 LS ++GR L+WQ ++G +KA FP EL VS +Q V+L+LFND KL+F++I D TGI +L+R L +L K ++L + LP + +++ D F FN F + L+R+KV A+ KET E T ++V +DR++Q++A+IVRIMK RK L H+ L++E+ +QL +F P +KKRIESLI+REYLER K + +IYNY+A Sbjct: 533 LSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.070e-40 Identity = 92/208 (44.23%), Postives = 133/208 (63.94%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQK---LSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 LSK++GR+L+W S+G ++ F K +L VS +V+L+LF D ++ L F++I + T IE +L+R LQSLAC K ++L K PKGR+V D F FNE F + L RIK++ + E E T E+V + R++Q DA IVR+MK RKV H L+ E+ +QL +F P +K+RIE+LI+REYL+R +N +IY YLA Sbjct: 578 LSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.805e-38 Identity = 94/229 (41.05%), Postives = 138/229 (60.26%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEF--PKGKKE--------------------LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK--VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L+K+SGR+L Q+ +G L A F P K++ L VS FQ +LMLFN+ +K +F++I+ T I ++EL R LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 540 LAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.805e-38 Identity = 94/229 (41.05%), Postives = 139/229 (60.70%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEF--PKGKKE--------------------LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK--VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L+K+SGR+L Q+ +G L A F P K++ L VS FQ +LMLFN+ +K +F++I+ T I ++EL R LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 540 LAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.970e-38 Identity = 94/229 (41.05%), Postives = 138/229 (60.26%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEF--PKGKKE--------------------LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK--VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L+K+SGR+L Q+ +G L A F P K++ L VS FQ +LMLFN+ +K +F++I+ T I ++EL R LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 540 LAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768 The following BLAST results are available for this feature:
BLAST of CX069433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069433 ID=CX069433; Name=CX069433; organism=Citrus sinensis; type=EST; length=849bpback to top |