DR403837

Overview
NameDR403837
Unique NameDR403837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9965 contig Csv1_Contig9965:11..661. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 3.361e-96
Identity = 172/199 (86.43%), Postives = 178/199 (89.45%), Query Frame = 1
Query:   55 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIERDCRVEICTQKKTILSVEDIIALIGDKCGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ 651
            MAKPV IEVWNPNGKYRVVSTKPMPGTRWINLLIE+DCRVEICT+KKTILSVEDI+ALIGDKC GVIGQLTEDWGE LF+ALSRAGGKAFSNMAVGYNNVDVNAANKYG+AVGNTPGV                 RRIVEADEFMRAG YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY+DLYQ
Sbjct:    1 MAKPVQIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTEKKTILSVEDILALIGDKCDGVIGQLTEDWGEVLFSALSRAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQ 199          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 1
Query:  316 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            K  +  AVGY+N+D+  A K GI V NTPGV                 RRIVEAD F+R+G +     GW P +F+G  LKG+T+G++G GRIG A A+   +GF M +IYY
Sbjct:   69 KIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAK-RAKGFGMKIIYY 179          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.063e-17
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  241 CGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD-GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 642
            C  ++  LT+     +F A  +   +  +  AVGY+N+DV  A K GI V NTPGV                 RR+VEAD ++R G +   W P + +G  + G+T+G++G GRIG+A AR   +GF M ++YYD
Sbjct:   46 CDALVSLLTDPIDAEVFEAAPKL--RIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVAR-RAKGFGMRILYYD 177          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16
Identity = 60/185 (32.43%), Postives = 96/185 (51.89%), Query Frame = 1
Query:   97 KYRVVSTKPMPGTRWINLLIERDCRVEICTQKKTILSVEDIIALIGDKCGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            K +V  T+ +P    IN+L E +  VE+  +++ I   E ++  + D    ++  L+E   + +F    R   +  +N AVGY+N+DV  A + GI V NTP V                 R +V+ D+F+R+G +      W P  F+G  L G+T+G++G GRIG A AR   +GF M ++YY
Sbjct:    2 KPKVFITRAIP-ENGINML-EEEFEVEVWEEEREIPR-EKLLEKVKD-VDALVTMLSERIDQEVFENAPRL--RIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIAR-RAKGFNMRILYY 179          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 1
Query:  325 SNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            +N AVGY+NVDV  A + GI V NTP V                 RR++EAD F R+G +      W P +F+G+ + G+T+G+IG GRIG A AR   +GF M ++YY
Sbjct:   72 ANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVAR-RAKGFGMRILYY 179          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15
Identity = 60/184 (32.61%), Postives = 96/184 (52.17%), Query Frame = 1
Query:   97 KYRVVSTKPMPGTRWINLLIERDCRVEICTQKKTILSVEDIIALIGDKCGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY 636
            K +V+ T+ +P    I +L E    VE+   +  I S E ++  + D    ++  L+E     +F A  R   K  +N AVGY+N+D+  A K G+ + NTP V                 RR++EAD+F+R+G +      W P +F+G  + G+T+G++G GRIG A AR   +GF M ++Y
Sbjct:    2 KPKVLITRKIP-ENGIKMLREH-FEVEVWEDEHEI-SREVLLEKVRD-VDALVTMLSERIDAEVFDAAPRL--KIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIAR-RAKGFGMRILY 178          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.803e-15
Identity = 59/184 (32.07%), Postives = 90/184 (48.91%), Query Frame = 1
Query:   97 KYRVVSTKPMPGTRWINLLIERDCRVEICTQKKTILSVEDIIALIGDKCGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDG-WLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 645
            K  V    P PG      +++  C V +   K    S E+++  I DK   ++  LT+     +  A      K  S  +VG++++D+  A K GI V +TPGV                 RRIVEAD+ +R G +D  W P    G  LKG+T+G++G GRIG A A+ +   F + ++YYD+
Sbjct:    5 KVYVTRIIPEPGLS----MLKECCDVVVHESKDWPPSREELLRNIRDK-DALLCLLTDKIDAEVMDAAPNL--KVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRL-SSFDVKILYYDI 180          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.803e-15
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  250 VIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            ++  L+E     +F A  R   +  +N AVGY+N+DV  A + GI V NTP V                 RR++EAD F R+G +      W P  F+G  + G+T+G++G GRIG A AR    GF M ++YY
Sbjct:   49 LVTMLSERIDSEVFDAAPRL--RIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVAR-RARGFGMRILYY 179          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.803e-15
Identity = 54/167 (32.34%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  151 LIERDCRVEICTQKKTILSVEDIIALIGDKCGGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            ++E++  VE+   ++ I   E ++  + D    ++  L+E     +F    R   +  +N AVGY+N+DV  A K GI V NTPGV                 R +V+ D+F R+G +      W P  F+G  + G+T+G+IG GRIG A A+    GF M ++YY
Sbjct:   19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK-RARGFDMRILYY 180          
BLAST of DR403837 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1
Query:  325 SNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAG----LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY 639
            + MAVG++N+DV  A + GI V NTPGV                 RR+VEAD F+R G    L  GW P + +G  L+G+T+G++G GRIGS  A  + + F M +IY+
Sbjct:   73 AQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAE-IGKAFGMRIIYH 180          
The following BLAST results are available for this feature:
BLAST of DR403837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DHGY_CUCSA3.361e-9686.43Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_THELI8.186e-1844.64Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_KORCO4.063e-1737.04Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_PYRFU4.492e-1632.43Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEGJ1.307e-1542.20Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_THEON2.229e-1532.61Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_THEPD3.803e-1532.07Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_PYRKO3.803e-1536.57Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRAB3.803e-1532.34Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_AERPE8.472e-1541.28Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403837 ID=DR403837; Name=DR403837; organism=Citrus sinensis; type=EST; length=651bp
GGGGACACNNNCTGTTTTTGGCACTTGGAACTTGAAACTGCCAACTTAGC
TTCAATGGCGAAGCCAGTTTCAATTGAAGTGTGGAACCCAAATGGAAAAT
ATAGAGTTGTTAGTACCAAGCCTATGCCTGGAACCCGCTGGATCAATCTC
TTAATCGAACGAGATTGCCGTGTTGAAATATGTACCCAGAAGAAAACTAT
ACTCTCTGTTGAAGATATCATTGCTTTGATTGGTGACAAGTGCGGTGGAG
TCATTGGACAGTTGACAGAGGACTGGGGAGAGACTTTGTTTGCTGCACTG
AGTAGGGCAGGAGGAAAGGCTTTTAGTAACATGGCTGTTGGTTACAACAA
TGTTGACGTTAATGCTGCTAACAAATATGGTATTGCTGTTGGAAACACTC
CTGGAGTACTTACTGAAACAACAGCAGAGTTAGCAGCTTCGCTCTCTCTA
GCGGCTGCAAGAAGAATTGTTGAAGCAGATGAGTTTATGAGAGCTGGCTT
ATACGATGGATGGCTTCCAAATCTATTCGTCGGGAACTTGCTCAAGGGAC
AGACTGTCGGTGTGATTGGAGCTGGTCGTATCGGATCTGCCTATGCTAGA
ATGATGGTTGAAGGGTTCAAAATGAACCTCATTTACTATGATCTTTACCA
A
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