DR403830

Overview
NameDR403830
Unique NameDR403830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6131 contig Csv1_Contig6131:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 3
Query:  129 SFSPADDYLIDCGSTVDTTV-DNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDT-AKFVNGDKIDNFDALSKQALEVMY 707
            +F+P D+YLI+ GS  +T+    R F+SDSS   S  L+ + RS SI  ++ +   P +YN+ARVF     Y F++  KGTH +RLHF    +S+F    A+F VL+NG+ V+++FS  +++    VKE+++ I+   L I+FLP   S F FVNA+EV SAPKD I+D   K V  +    F  LS Q LE ++
Sbjct:   25 AFTPTDNYLINSGSNTNTSFFTTRSFLSDSSEPGSSFLS-TDRSISISDTNPSPDSPVLYNTARVFPVGGSYKFQVTTKGTHFIRLHFAPFKASRFNLRSAKFRVLINGFSVINSFSTSSVV----VKEFILKIDDPVLEISFLPFKASGFGFVNAVEVFSAPKDYIMDQGTKLVIPNSAQIFSNLSSQVLETVH 214          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  132 FSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHR-NGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            F+P D+YLI CGS+ + T  NR+F+ DS  +S   L     + S+  S   N     IY +ARVF   + Y FKI   G H +RLHF  +N+S +    A   V+   +V+L+NFS  N   S   KEY + + +E L ++F+P+  S   FVNAIEV+S P +LI D A  +N      F  LS  A E +Y
Sbjct:   26 FNPPDNYLISCGSSQNITFQNRIFVPDSLHSS---LVLKIGNSSVATSTTSNNSTNSIYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFNNFNGSYIFKEYTVNVTSEFLTLSFIPSNNS-VVFVNAIEVVSVPDNLIPDQALALNPS--TPFSGLSLLAFETVY 212          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 79/196 (40.31%), Postives = 109/196 (55.61%), Query Frame = 3
Query:  120 IALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            I   F+P D+YLI+CGS  + T+  R+F+SD  + SS LL   T SK I  S       +IY++ARVF   S Y F +  +G H VRL+F   +   F    A+F V    +V+LS+F+V    +S  VKEY + +    LV+ F P+  S FAFVNAIEVIS P  LI  + +FV       F  +S Q LE ++
Sbjct:   21 ICHGFTPVDNYLINCGSPTNGTLMGRIFLSD--KLSSKLL---TSSKEILASVGGNSGSDIYHTARVFTEVSSYKFSV-TRGRHWVRLYFNPFDYQNFKMGSAKFAVSSQSHVLLSDFTV---TSSKVVKEYSLNVTTNDLVLTFTPSSGS-FAFVNAIEVISIPDTLITGSPRFVGNPA--QFPDMSMQGLETIH 204          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 77/197 (39.09%), Postives = 114/197 (57.87%), Query Frame = 3
Query:  129 SFSPADDYLIDCGSTVDTTV-DNRLFISDSSRASSHLLT---FSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            SF+PAD+YLIDCGS+ +T + D R F SD  ++ + L T     T   SI ++  N     +Y +AR+F   S Y F I   G H +RLHFY LN   +   ++ F V  +  V+L +FS G+  +S   KEYLI+  AEKL + F P  K   AF+NA+E++S P +L+ D+A  V   +  +F  LS  +LE+++
Sbjct:   27 SFTPADNYLIDCGSSDETKLSDGRNFKSDQ-QSVAFLQTDEDIKTSVDSIPITDSNASTLPLYLTARIFAGKSTYSFYISRPGRHWIRLHFYPLNHPLYNLTNSVFSVTTDTTVLLHDFSAGD-TSSIVFKEYLIYA-AEKLSLYFKP-HKGSTAFINAVEIVSVPDELVPDSASSV--PQAPDFKGLSSFSLEILH 217          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23
Identity = 71/196 (36.22%), Postives = 110/196 (56.12%), Query Frame = 3
Query:  120 IALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            +   + P D+YLI+CGS+ + TV +R+FISD+   +S+ LT  + ++ +  S+RN    +IY +AR+F   S+Y F +  +G H +RLHF       F    A+F V    +V+LS+F+V    +S  +KEY + +  + L + F P+  S FAF+NA+EV+S P  L      F        F  LS QALE +Y
Sbjct:   21 LCYGYVPVDNYLINCGSSTNVTVTSRVFISDN--LASNFLT--SPNEILAASNRNSN-SDIYQTARIFTGISKYRFSVA-RGRHWIRLHFNPFQYQNFQMVSAKFSVSSETHVLLSDFTV----SSRVMKEYSLNVATDHLELTFTPSGDS-FAFLNALEVVSVPDTLFSGDPSFAGSP--GKFQGLSWQALETVY 203          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22
Identity = 78/205 (38.05%), Postives = 104/205 (50.73%), Query Frame = 3
Query:  117 GIALSFSPADDYLIDCGSTVDT-TVDNRLFISDSSRASSHLLTFSTRSKSIQLSH--RNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSV---GNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILD--TAKFVNGDKIDNFDALSKQALEVMY 707
            G A  F PADD LIDCGS   + T D R+F SD        + +    + IQ+S    +     IY +AR+F   + Y F +   G H VRLHF    + +F    A F VL   YV+L NF +    N   +A  KEYL+ +   +  + F P MKS  AF+NAIEV+SAP +LI D  TA F     +  F  LS  A + +Y
Sbjct:   47 GPATGFKPADDILIDCGSKSSSKTPDGRVFKSDQET-----IQYIEAKEDIQVSAPPSDKVASPIYLTARIFREEATYKFHLTRPGWHWVRLHFLAFPNDKFDLQQATFSVLTEKYVLLHNFKISNNNNDSQAAVQKEYLVNMTDAQFALRFRP-MKSSAAFINAIEVVSAPDELISDSGTALF----PVIGFSGLSDYAYQSVY 241          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 72/198 (36.36%), Postives = 101/198 (51.01%), Query Frame = 3
Query:  132 FSPADDYLIDCGSTVDT-TVDNRLFISDSSRASSHLLTFSTRSKSIQLSHR-NGKLPE-IYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASV---KEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            F PADD LIDCGS   T T + R+F SDS         +      IQ+S   + KLP  IY +A++F   + Y F +   G H VRLHF+   + +F    A F VL   YV+L NF + N    +     KEYL+ +   +  + F P MK   AF+N IE++SAP +LI D    +    ++ F  LS  A + +Y
Sbjct:   51 FKPADDILIDCGSKSSTKTPEGRVFKSDSETVQ-----YIEAKDDIQVSAPPSDKLPSPIYLTAKIFREEAIYKFHLTRPGWHWVRLHFFAFPNDKFDLQQATFSVLTEKYVLLHNFKLSNDNNDSQATVQKEYLLNMTDAQFALRFKP-MKGSAAFINGIELVSAPDELISDAGTSL--FPVNGFSGLSDYAYQSVY 240          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 69/234 (29.49%), Postives = 105/234 (44.87%), Query Frame = 3
Query:   54 MENLRKNQAXXXXXXXXXXXYGIALSFSPADDYLIDCGSTVDTTVDNRLFISD-SSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVG---------------NIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMY 707
            M  LRK              Y I    + +  +L+DCGS   T VD R ++ D S   S  L  F   + S   S  +    EIY +ARVFD    Y F+   +G + VRLHF          +++ F V  +G  ++ + ++                N  AS+ VKE+L+     KLV++F+P  K  F FVNAIE++S    L  ++   V G +++    L  + +E MY
Sbjct:    1 MSKLRKKYLEHLLCVLIFFTYVIGYGEAQSKSFLVDCGSNATTEVDGRTWVGDLSPNKSVTLQGFDAITAST--SKGSSVYAEIYKTARVFDAVLNYTFEGITQGNYFVRLHFSPFAIENHNVNESSFSVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPE-KGSFGFVNAIEIVSVDDKLFKESVTKVGGSEVEL--GLGGRGIETMY 229          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 51/175 (29.14%), Postives = 96/175 (54.86%), Query Frame = 3
Query:  129 SFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNS-SQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVN 650
            +++  +++ ++CGS  +     + F+ D++ +S++ ++F+ +   + ++ ++   PEIY + R+F  PS Y FK+   G H VRLHF  + S +  ++              L +FS  N+  +  V+E+L+ +N+ +  I F+P   S  A +NAIEV SAP DL + +A   N
Sbjct:   32 TYTRPENFYVNCGSDSNVFYGGQTFVGDTN-SSTNSVSFTNKGTEV-INDQSSVAPEIYRTVRIFRHPSSYKFKLDSLGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHHLKSFSPQNLTNTPRVEEFLLMMNSLEFEIRFVPD-HSSLALINAIEVFSAPDDLEIPSASDKN 203          
BLAST of DR403830 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 3
Query:  135 SPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVF--DRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDK 659
            S +D + I+CGS  + TV+NR F+SD++        FS  +        +G    ++ +ARVF  +  S Y F I + G  ++R++F  L S+      A+F V    + ++  +       ++ V+EY++ +  + L++ FLP   S  +F+NA+EV+  P+ LI + AK +   K
Sbjct:   26 SVSDTFFINCGSPTNVTVNNRTFVSDNNLVQG----FSVGT----TDSNSGDESTLFQTARVFSDESSSTYRFPIEEHGWFLIRIYFLPLVSASQDLTTARFSVSAQNFTLIREYKPS---TTSVVREYILNVTTDSLLLQFLPRTGS-VSFINALEVLRLPETLIPEDAKLIGTQK 190          
The following BLAST results are available for this feature:
BLAST of DR403830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
Y5241_ARATH8.825e-3241.54Probable receptor-like protein kinase At5g24010 OS... [more]
THE1_ARATH5.011e-2738.86Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
HERK_ARATH8.000e-2540.31Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5613_ARATH1.782e-2439.09Probable receptor-like protein kinase At5g61350 OS... [more]
Y5597_ARATH9.780e-2336.22Probable receptor-like protein kinase At5g59700 OS... [more]
Y4391_ARATH3.716e-2238.05Probable receptor-like protein kinase At4g39110 OS... [more]
Y2214_ARATH7.008e-2136.36Probable receptor-like protein kinase At2g21480 OS... [more]
Y1357_ARATH2.493e-1829.49Probable receptor-like protein kinase At1g30570 OS... [more]
Y2232_ARATH8.866e-1629.14Probable receptor-like protein kinase At2g23200 OS... [more]
Y2393_ARATH2.184e-1428.81Probable receptor-like protein kinase At2g39360 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G14 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403830 ID=DR403830; Name=DR403830; organism=Citrus sinensis; type=EST; length=707bp
GGGGATTCATCTAATCTCATCTCAGTTCTTCAACTAGCTTTTGTTTGTAT
CTAATGGAGAATCTGCGCAAAAACCAAGCTTTGTTTCTCTTATTACTGTC
TCTATCATCTTTCTATGGTATTGCTCTCTCTTTCTCTCCAGCCGATGACT
ACCTCATTGACTGCGGTTCCACCGTGGACACCACCGTAGACAATCGCCTC
TTCATTTCCGACTCCTCCCGCGCCAGCTCGCATCTCTTGACCTTCTCAAC
TCGGTCAAAATCGATCCAACTTAGTCACCGAAATGGTAAATTACCTGAAA
TTTATAACTCAGCAAGGGTTTTCGATAGACCATCGAGGTATATTTTCAAG
ATCAGAGACAAGGGAACCCACATGGTACGCCTACACTTCTATCAATTAAA
TTCGTCTCAATTTGTTTCAGATGATGCTCAATTTCACGTTTTGGTTAATG
GATATGTTGTTTTGAGCAATTTTAGTGTTGGTAATATAATTGCAAGTGCT
AGTGTTAAGGAGTATCTTATCTGGATTAATGCTGAAAAGCTTGTAATTGC
GTTTTTGCCCACTATGAAATCGAAATTTGCATTTGTTAATGCCATTGAAG
TGATATCCGCACCTAAAGATTTGATTTTGGATACTGCCAAGTTTGTCAAT
GGCGATAAAATTGACAACTTTGATGCGCTAAGTAAACAAGCGCTTGAAGT
TATGTAT
back to top