DR403827

Overview
NameDR403827
Unique NameDR403827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6130 contig Csv1_Contig6130:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403827 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1
Query:  427 VTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV 720
            V+DL G  LFL L+ W   +G IY+LA GP+ FVV+SDP IA+HVLR     Y KG+++E+ E + G G   A+   W  RRRA+ P+ HK YL  +V
Sbjct:   91 VSDLFGKPLFLSLYDWFLEHGGIYKLAFGPKAFVVISDPIIARHVLRENAFSYDKGVLAEILEPIMGKGLIPADLDTWKLRRRAITPAFHKLYLEAMV 188          
BLAST of DR403827 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 1
Query:  256 PNFVTIKSCINRNPKEESGSKARSWVSPDWLTSLTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV 720
            P  ++   C + N  ++  S+     + + LT L    +I      ++P+A      V+DLLG  LF  L+ W   +G +Y+LA GP+ FVVVSDP +A+H+LR     Y KG+++++ E + G G   A+   W  RRR +AP+ H  YL  +V
Sbjct:   37 PKRISSIRCQSINTDKKKSSRNLLGNASNLLTDLLSGGSI-----GSMPIAEGA---VSDLLGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMV 183          
BLAST of DR403827 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1
Query:  346 LTSLTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV 720
            LTSL     +      ++P+A      VTDL    LF  L+ W   +G +Y+LA GP+ FVVVSDP +A+H+LR     Y KG+++++ E + G G   A+   W  RRR +AP  H  YL  +V
Sbjct:   76 LTSLLSGANL-----GSMPIAEGA---VTDLFDRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLETWKQRRRVIAPGFHTSYLEAMV 192          
The following BLAST results are available for this feature:
BLAST of DR403827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C97B3_ARATH1.041e-1947.96Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]
C97B2_SOYBN1.359e-1934.19Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C97B1_PEA2.564e-1838.40Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403827 ID=DR403827; Name=DR403827; organism=Citrus sinensis; type=EST; length=721bp
GGGATGGGATTGGTTTATGGGTTGCAACTTGGGAATGATTAGTTGGTGTT
TAGCGAAAGGCAAAGTAAGCAAACCCCATCCATTCCTCACTCCGGCGTAG
CTCTATATATGGCGCCAAGTACAGCAGCAGGCTAACTGAATCAGTAAGTC
ATAGTGACGACGTCGTTTCAAATTGGAAGCATGCAATCATTACATTCTTT
CTCATCGTTATCCGTCCTCGCACCGCCAGTACGTCTCCAGAAACCCACCA
AAACACCCAATTTTGTCACCATCAAATCCTGCATTAACAGAAACCCAAAA
GAAGAGTCGGGCAGCAAAGCACGCTCATGGGTCAGCCCAGATTGGCTCAC
TTCGTTGACCAAGTCTCTGACCATAACCCAAAGCGATGAGTCGAATATAC
CTGTAGCGAGTGCTAAGCTTGACGACGTGACTGATCTTCTTGGTGGAGCT
CTGTTTCTTCCCTTGTTTAAATGGATGAACGTGTACGGACCCATTTACAG
GCTGGCTGCTGGACCTAGAAATTTCGTTGTGGTTAGTGACCCGGCAATTG
CTAAGCATGTTCTGAGGAACTACGGCACCAAGTATGCTAAAGGTCTTGTA
TCGGAGGTCTCCGAGTTTCTCTTTGGCTCGGGTTTTGCCATTGCTGAAGG
CCCTCTTTGGATGGGAAGGCGCAGGGCTGTGGCTCCATCTCTTCACAAGA
AATACTTATCTGTGATAGTTG
back to top