CX054054

Overview
NameCX054054
Unique NameCX054054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4121 contig Csv1_Contig4121:316..1145. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX054054 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.160e-48
Identity = 95/170 (55.88%), Postives = 124/170 (72.94%), Query Frame = -1 
Query:  192 LNLDAAFEQKNEIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNXXXXXXXXXXXXXXXXXXXXILQIKQAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIATQIREGLLQA 701
            +NLD  FEQK E+AK+V EELEK M  YGY I   L+VDI PD  V+RAMN                    ILQ+K+AE EAEAKYL G+G+ARQRQAI DGLR+++L FS  V GT++K+VMD++++TQYFDT+K++G SSK+++VFIPHGPG V+DI  QIR GL+++
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
The following BLAST results are available for this feature:
BLAST of CX054054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO5.160e-4855.88Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_9H12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H12-O24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054054 ID=CX054054; Name=CX054054; organism=Citrus sinensis; type=EST; length=830bp
TATACAAATAATTTCGCTCGAGCCCTTTTTTTCCCCCCATTGTGCAAGTA
ATAATATAACAAAGGACGGTGCTTGGAATAAAATACTAATAAAGTTTAGA
TATTAGAAACACCAAATGCAGGACTATGATAAGCACTAGGACTAGTAAAG
GACTTAGCATATCAGCAGAATATCTACTTCTGAACTTGATTGGCCTGAAG
GAGTCCCTCCCTGATTTGTGTAGCAATGTCCTTAACAGCACCAGGTCCAT
GTGGGATAAAAACAGATGAGGACTTCGAGGATGCTCCAATCTCCTTCATG
GTGTCGAAGTATTGAGTCACCAGAACCATGTCCATGACATCCTTGGAGGT
TGTTCCAGGAACATTCTCAGAGAAGGCAAGCACACTGTCTCTTAACCCAT
CAACAATAGCCTGGCGCTGACGTGCTATCCCAAGTCCGGACAGGTATTTT
GCCTCAGCCTCCCCTTCAGCTTGTTTGATTTGCAATATCTTCTCTGCCTC
AGCCTTCTCATTTGCTGCCAGCCTCAGTCTTGCAGCTGCATTGATCTCAT
TCATTGCTCTCTTTACATGAACATCTGGCTCAATATCCACAATAAGAGTC
TGCACTATCTCATACCCATAATGAGACATGGCCTTTTCGAGCTCCTCTTC
AACGGCTTTGGCAATTTCATTCTTCTGCTCAAAGGCGGCATCTAAGTTCA
GTTTTGGTACGCTTGCCCTGATAACATCAAAGACATAGGCTTGGATTTGG
CCCCTGGTGTTGGAGAGCTTATAGAAAGCATCATAAGCTTTATCAGCCAA
GGCACGATATTGAACGGAAGCAACCACATT
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