CX054045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX054045 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 3.176e-113 Identity = 200/256 (78.12%), Postives = 224/256 (87.50%), Query Frame = -1 Query: 165 FGQLVAEKAVKGKKE-NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRT 929 FGQL E + K+ QE+ CIL VF+KMH+L+IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN+VYGV HGLLMG R+N+W+QA SLFD+V MD STASAFYNALTDMLWHFGQKRGA+LV LEG+ RQVWENVWS+SCLDLHLMSSGAARAMVHAWLLNI SIV+EGHELPK+LSILTGWGKHSKVVGDGALRRAVEVLL GM APF ++ CN+GRF S+G +VA+WLRES TLK+L+LHD T Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHDHIT 889
BLAST of CX054045 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.284e-13 Identity = 60/226 (26.55%), Postives = 103/226 (45.58%), Query Frame = -1 Query: 204 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 848 + Q M L ++P++ T++ +L+ C+ S D + + + AH L+ +N+ A + D + D + +A+ D L GQK A V ++ V+ + E SC ++LH+MS G A + L + P + I+TGWG+ S+V G +R+AVE LL G+PF+ + N G F+ +G + WL +S Sbjct: 631 LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP----AHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQS 852
BLAST of CX054045 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 56/222 (25.23%), Postives = 97/222 (43.69%), Query Frame = -1 Query: 204 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ--ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-----ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 848 + Q M L + P++ T++ +L+ C+ S D + + + + + + D V+ + D + D + +A+ D L G K A V + V+ E +S ++LH+MS G A + L + + P + I+TGWG+ S+V G +R+AVE LL PF+ N N G F+ +G + +WL ES Sbjct: 626 LLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKNWLLES 847 The following BLAST results are available for this feature:
BLAST of CX054045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX054045 ID=CX054045; Name=CX054045; organism=Citrus sinensis; type=EST; length=929bpback to top |