CX054041

Overview
NameCX054041
Unique NameCX054041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX054041_ssr286 microsatellite CX054041_ssr286:286..297. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4064 contig Csv1_Contig4064:1..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.345e-65
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 2 
Query:  557 VNRLGMDVQVDYFNITRKQIDKLLGASKARDFLMKESIFSITIGANDFLNNYLLPVLSVGARITESPDAFVDDMINHLRDQLT 805
            VNRLGMDVQVD+FN TRKQ D LLG  KA+D++ K+SIFSITIGANDFLNNYL P+LSVG R T++PD F+ DM+ HLRDQLT
Sbjct:  146 VNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNNYLFPLLSVGTRFTQTPDDFIGDMLEHLRDQLT 228

HSP 2 Score: 110.153 bits (274), Expect = 4.345e-65
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 2 
Query:   20 DDHNEALGASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLIISGKH 232
            D     LGASF+FGDSLVDAGNNNYL TLS+ANM+PNGIDFKASGG PTGR+TNGRTI DIVG+ + S  +
Sbjct:   40 DKKGGGLGASFIFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANY 110

HSP 3 Score: 50.0618 bits (118), Expect = 4.345e-65
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 1 
Query:  319 GEELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATGRIFVS 456
            GEELG  +YA+P+L+P++ GKA+L            MNATGRIFV+
Sbjct:  102 GEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVN 147
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.169e-60
Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 2 
Query:  557 VNRLGMDVQVDYFNITRKQIDKLLGASKARDFLMKESIFSITIGANDFLNNYLLPVLSVGARITESPDAFVDDMINHLRDQL 802
            VNRLGMD+QVDYF  TRKQ DKLLG  KARD++ K S+FS+ IG+NDFLNNYL+P ++  AR+T++P+ FVDDMI+HLR+QL
Sbjct:  132 VNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFLNNYLVPFVAAQARLTQTPETFVDDMISHLRNQL 213

HSP 2 Score: 103.99 bits (258), Expect = 2.169e-60
Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 2 
Query:   14 AADDHNEALGASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGK 211
            A+     AL ASFVFGDSLVDAGNNNYL TLS+AN  PNGIDFK S GNPTGR+TNGRTIADIVG+
Sbjct:   24 ASAGDQRALAASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGE 89

HSP 3 Score: 48.9062 bits (115), Expect = 2.169e-60
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 1 
Query:  319 GEELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATGRIFVS 456
            GE+LGQ  YAVPYL+PN++G+A+L            +NATG +FV+
Sbjct:   88 GEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVN 133
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.229e-19
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2 
Query:   44 ASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLI 217
            A FVFGDSLVD+GNNNYL T ++A+  P GIDF      PTGR++NG  I D++ + I
Sbjct:   28 AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTR--RPTGRFSNGLNIPDLISEAI 83

HSP 2 Score: 45.0542 bits (105), Expect = 1.229e-19
Identity = 23/68 (33.82%), Postives = 41/68 (60.29%), Query Frame = 2 
Query:  557 VNRLGMDVQVDYFNITRKQIDKLLGASKARDFLMKESIFSITIGANDFLNNYLLPVLSVGARITESPD 760
            +N + M  Q+DYF   ++++ +L+G  + +  L+ +++  IT+G NDF+NNY L   S  +R    PD
Sbjct:  124 INIIRMYQQLDYFQQYQQRVSRLIGKPQTQR-LVSQALVLITVGGNDFVNNYFLFPYSARSRQFTLPD 190

HSP 3 Score: 26.9498 bits (58), Expect = 1.229e-19
Identity = 13/45 (28.89%), Postives = 21/45 (46.67%), Query Frame = 1 
Query:  322 EELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATGRIFVS 456
            E +G     +PYLSP   G+++L            +N TG  F++
Sbjct:   81 EAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFIN 125
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.615e-18
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 2 
Query:   44 ASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLI 217
            A FVFGDSLVD GNN+YL T ++A+  P GID+      PTGR++NG  I DI+ + I
Sbjct:   29 AFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTR--RPTGRFSNGLNIPDIISEAI 84

HSP 2 Score: 42.3578 bits (98), Expect = 4.615e-18
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 2 
Query:  557 VNRLGMDVQVDYFNITRKQIDKLLGASKARDFLMKESIFSITIGANDFLNNYLLPVLSVGARITESPDAFV 769
            VN + +  Q++YF   + ++  L+G  +A   L+ +++  IT+G NDF+NNY L   S  +R    PD  V
Sbjct:  124 VNIIRISKQMEYFEQYQLRVSALIGP-EATQQLVNQALVLITLGGNDFVNNYYLIPFSARSRQYALPDYVV 193

HSP 3 Score: 28.1054 bits (61), Expect = 4.615e-18
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 1 
Query:  322 EELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATGRIFVS 456
            E +G P   +PYLSP+ TG+ +L            +N TG  FV+
Sbjct:   82 EAIGMPS-TLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVN 125
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.001e-17
Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 2 
Query:   44 ASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLIISGKHINL*ILQYGTSASLIYYAIN 292
            A+FVFGDSLVDAGNNNYL TLSKAN  PNGIDF    G+PTGR+TNGRTI DIV + + S + +    L   TS SLI   +N
Sbjct:   30 ANFVFGDSLVDAGNNNYLATLSKANYVPNGIDF----GSPTGRFTNGRTIVDIVYQALGSDE-LTPPYLAPTTSGSLILNGVN 107

HSP 2 Score: 68.9366 bits (167), Expect = 4.151e-14
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 2 
Query:  563 RLGMDVQVDYFNITRKQIDKLLGASKARDFLMKESIFSITIGANDFLNNYLLPVLSVGARITESPDAFVDDMINHLRDQLT 805
            R+ +D Q+D F  TR+ I   +G S+A   L + +IFS+T G+ND +NNY  PV+S   R   +P+ FVD MI+  R QLT
Sbjct:  126 RINVDAQLDNFATTRQDIISWIGESEAAK-LFRSAIFSVTTGSNDLINNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLT 205

HSP 3 Score: 30.0314 bits (66), Expect = 4.151e-14
Identity = 13/43 (30.23%), Postives = 21/43 (48.84%), Query Frame = 1 
Query:  322 EELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATGRIF 450
            + LG      PYL+P ++G  IL            +N+TG++F
Sbjct:   81 QALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLF 123
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.660e-16
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 2 
Query:   47 SFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLIISGKHINL*ILQYGTSASLIYYAIN 292
            +F+FGDSLVD GNNNY+ TLSKA+  P GIDF  S G PTGR+TNGRTI+DIVG+  +  K      L+  T A+ I   IN
Sbjct:   26 NFIFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGE-ALGAKSPPPPYLEPNTEANTIRNGIN 106
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.814e-15
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 2 
Query:   44 ASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIV 205
            A+FVFGDSLV+ GNNNYL TL+KAN  PNGIDF    G+PTGR+TNGRTI DI+
Sbjct:   30 ANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF----GSPTGRFTNGRTIVDII 79

HSP 2 Score: 22.7126 bits (47), Expect = 1.814e-15
Identity = 11/40 (27.50%), Postives = 16/40 (40.00%), Query Frame = 1 
Query:  322 EELGQPHYAVPYLSPNSTGKAILXXXXXXXXXXXXMNATG 441
            + LG      PYL+P + G  IL            +N+ G
Sbjct:   81 QALGSDELTPPYLAPTTRGPLILNGANYAPGGSGPLNSPG 120
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 2 
Query:   23 DHNEALGASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIAD 199
            DH     A FVFGDSLVD+GNNNY+PTL++AN  P GIDF    G PTGR+ NGRT+ D
Sbjct:   23 DHQPLAPAFFVFGDSLVDSGNNNYIPTLARANYFPYGIDF----GFPTGRFCNGRTVVD 77
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:    8 GDAADDHNEALGASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIVGKLI 217
            G+ + +      A FVFGDSLVD GNNN+L +L+++N  P GIDF  +G  PTGR++NG+TI D +G+L+
Sbjct:   37 GEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDF--AGNQPTGRFSNGKTIVDFIGELL 104
[Close]
BLAST of CX054041 vs. ExPASy Swiss-Prot
Match: GDL33_ARATH (GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 2 
Query:   44 ASFVFGDSLVDAGNNNYLPTLSKANMRPNGIDFKASGGNPTGRYTNGRTIADIV 205
            A +V GDSLVD GNNN+LPT+ +AN  P G DF+  GG  TGR++NG+TIAD +
Sbjct:   43 AFYVIGDSLVDPGNNNHLPTMIRANYPPYGSDFE--GGKATGRFSNGKTIADYI 94
The following BLAST results are available for this feature:
BLAST of CX054041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GDL38_ARATH4.345e-6573.49GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL58_ARATH2.169e-6067.07GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL77_ARATH1.229e-1955.17GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
LTL1_ARATH4.615e-1853.45GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL64_ARATH7.001e-1761.45GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL81_ARATH2.660e-1656.10GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL63_ARATH1.814e-1572.22GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GLIP7_ARATH2.108e-1362.71GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL75_ARATH6.133e-1350.00GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL33_ARATH9.792e-1159.26GDSL esterase/lipase At2g04020 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_9H04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H04-O8-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054041 ID=CX054041; Name=CX054041; organism=Citrus sinensis; type=EST; length=903bp
CTATTTTGGTGATGCAGCTGATGATCATAATGAAGCTTTAGGAGCTTCTT
TTGTCTTTGGTGATTCTTTAGTCGATGCCGGAAACAATAATTATTTACCA
ACATTGTCAAAGGCAAATATGCGGCCAAATGGAATCGATTTTAAAGCATC
CGGCGGAAATCCTACAGGACGATACACCAATGGCAGAACCATTGCTGACA
TTGTTGGTAAGCTGATCATCTCCGGGAAGCATATTAACTTATGAATCCTA
CAGTACGGTACTAGTGCTTCATTAATTTATTATGCAATTAATTAATTACA
CATGTTTATTTGTTTCCAGGAGAGGAGCTGGGACAGCCACACTATGCTGT
GCCATACTTGTCTCCAAATTCAACTGGAAAAGCTATTTTATATGGGGTGA
ATTATGGCTCTGGAGGAGGAGGGGTCATGAATGCAACTGGGAGAATATTT
GTTAGTACACATATATAATTAATGGATTCCCATATACATTCATTTACATC
AATAAGCAGTAATATTATTAATGCATGTTGTTCTTTGTTAATTTATGTGA
CATCAGGTTAACAGGCTGGGAATGGATGTTCAGGTTGATTATTTTAACAT
CACTAGAAAACAGATTGATAAATTGTTGGGTGCATCCAAGGCAAGAGATT
TTCTTATGAAAGAATCCATCTTCTCCATCACAATTGGAGCAAATGATTTT
CTCAACAATTACCTTCTCCCAGTTCTCTCCGTCGGAGCAAGAATTACGGA
AAGCCCAGATGCTTTTGTTGATGACATGATCAATCACTTAAGAGACCAAC
TTACCGTACGTAAATCTTATACCAATCCATTAATTAACCTACATTCCGAG
TGCATCGATCTTTCTTTATGTATACACATAATATATGGTCTCTTTAATTT
TTA
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