DR403783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 5.073e-89 Identity = 159/176 (90.34%), Postives = 159/176 (90.34%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.476e-88 Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.476e-88 Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.476e-88 Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.928e-88 Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.928e-88 Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 4.295e-88 Identity = 155/176 (88.07%), Postives = 159/176 (90.34%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.609e-88 Identity = 157/176 (89.20%), Postives = 157/176 (89.20%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.326e-88 Identity = 157/176 (89.20%), Postives = 157/176 (89.20%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.011e-12 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
BLAST of DR403783 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.250e-87 Identity = 156/176 (88.64%), Postives = 157/176 (89.20%), Query Frame = 1 Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ 642 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL+DNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQ Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 HSP 2 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 600 KEVKVGLHCLPISSGLTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 749 K+ K+G P TSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDI Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212 The following BLAST results are available for this feature:
BLAST of DR403783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403783 ID=DR403783; Name=DR403783; organism=Citrus sinensis; type=EST; length=749bpback to top |