DR403776

Overview
NameDR403776
Unique NameDR403776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1497 contig Csv1_Contig1497:64..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 5.546e-96
Identity = 174/203 (85.71%), Postives = 184/203 (90.64%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGD 634
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE N+S REALE+SSQQEYLKLKARYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQRLMEG  +N LQ   +A+D GYG +  Q QGD
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGD 202          

HSP 2 Score: 37.3502 bits (85), Expect = 5.546e-96
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  639 FFHALECEPTLQIGYQ 686
            FFH LECEPTLQIGYQ
Sbjct:  204 FFHPLECEPTLQIGYQ 219          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 4.694e-89
Identity = 165/196 (84.18%), Postives = 183/196 (93.37%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA--LELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYG 607
            MGRGRVELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+SSMLKTLERYQKCNYGAPE NV+++EA  LELSSQQEYLKLKARYE+LQRSQRNL+GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG
Sbjct:    1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYG 195          

HSP 2 Score: 27.335 bits (59), Expect = 4.694e-89
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  651 LECEPTLQIGY 683
            +ECEPTLQIGY
Sbjct:  213 IECEPTLQIGY 223          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.128e-87
Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 565
            MGRGRVELKRIE KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPN+S REALE+SSQQEYLKLK RYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQRLMEG Q+N
Sbjct:    1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.121e-86
Identity = 163/204 (79.90%), Postives = 181/204 (88.73%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ 628
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ E+   YG    Q Q
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQ 203          

HSP 2 Score: 31.9574 bits (71), Expect = 2.121e-86
Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  639 FFHALECEPTLQIGYQ 686
            FF  LECEP LQIGYQ
Sbjct:  209 FFQPLECEPILQIGYQ 224          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.945e-85
Identity = 161/205 (78.54%), Postives = 179/205 (87.32%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--CGYGLKPAQPQ 628
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSM++TLERYQKCNYG PEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ ED    YG    Q Q
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQ 204          

HSP 2 Score: 30.8018 bits (68), Expect = 3.945e-85
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  639 FFHALECEPTLQIGYQ 686
            FF  LECEP LQ+GYQ
Sbjct:  211 FFQPLECEPILQMGYQ 226          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.774e-80
Identity = 153/205 (74.63%), Postives = 170/205 (82.93%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGD 634
            MGRGRVELK IENKINRQVTFAKRR  LLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS+SMLKTLE+YQKCN+G+PE  + +RE    SSQQEYLKLK R EALQRSQRNLLGE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R  E  Q N  Q+ +PS     GYG +PAQ  G+
Sbjct:    1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIISRET--QSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGE 203          

HSP 2 Score: 34.2686 bits (77), Expect = 2.774e-80
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  639 FFHALECEPTLQIGY 683
            F+H LECEPTLQIGY
Sbjct:  205 FYHPLECEPTLQIGY 219          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 3.603e-71
Identity = 136/173 (78.61%), Postives = 152/173 (87.86%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 544
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS+MLKTL+RYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172          

HSP 2 Score: 25.7942 bits (55), Expect = 3.603e-71
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 FHALECEPTLQIGY 683
            +  LEC PTLQ+GY
Sbjct:  209 YQPLECNPTLQMGY 222          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 2.311e-70
Identity = 139/207 (67.15%), Postives = 160/207 (77.29%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE-----DCGYGLKPAQPQG 631
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+S+MLKTLERYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+R  +TQYMLD L++LQ KE +L +AN+ L  +L +   V    +    E     +  YG   A  QG
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQG 206          

HSP 2 Score: 28.4906 bits (62), Expect = 2.311e-70
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  642 FHALECEPTLQIGY 683
            + +LEC+PTLQIGY
Sbjct:  208 YQSLECDPTLQIGY 221          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.934e-69
Identity = 136/194 (70.10%), Postives = 155/194 (79.90%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSARE-ALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGY 604
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS  SM +TLERYQK +YG P+  +  +E  L  SS+ EYLKLKAR E LQR+QRNLLGE+LG L  KELE LE+QLD SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++L E  Q++       A   GY
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGY 194          

HSP 2 Score: 28.4906 bits (62), Expect = 1.934e-69
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  639 FFHALEC--EPTLQIGYQP 689
            FFH+LE   EPTLQIG+ P
Sbjct:  213 FFHSLEAAAEPTLQIGFTP 231          
BLAST of DR403776 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 4.289e-69
Identity = 133/185 (71.89%), Postives = 156/185 (84.32%), Query Frame = 2
Query:   26 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALEL-SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL 577
            MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+ SM KTLE+YQKC+Y  PE  V  RE+ +L +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQV 185          

HSP 2 Score: 25.7942 bits (55), Expect = 4.289e-69
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  639 FFHALEC--EPTLQIGY 683
            FFH L+   EPTLQIGY
Sbjct:  211 FFHPLDAAGEPTLQIGY 227          
The following BLAST results are available for this feature:
BLAST of DR403776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
AGL9_PETHY5.546e-9685.71Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MTF1_PEA4.694e-8984.18MADS-box transcription factor 1 OS=Pisum sativum G... [more]
AGL9_SOLLC9.128e-8790.56Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
SEP3_ARATH2.121e-8679.90Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL3.945e-8578.54Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE2.774e-8074.63Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
SEP1_ARATH3.603e-7178.61Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
SEP2_ARATH2.311e-7067.15Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MADS8_ORYSJ1.934e-6970.10MADS-box transcription factor 8 OS=Oryza sativa su... [more]
MADS7_ORYSJ4.289e-6971.89MADS-box transcription factor 7 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246D20 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246D20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403776 ID=DR403776; Name=DR403776; organism=Citrus sinensis; type=EST; length=689bp
GGGGGAAGAAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGCTGA
AGAGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGA
AATGGCCTATTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGA
GGTTGCTCTCATCATTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCA
GTAGTTCAAGCATGCTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTAT
GGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAG
CCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGAT
CCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAG
CTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATC
AACAAGAACTCAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGG
AACAGTTGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAG
GGATACCAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGG
TTATGGGCTTAAACCAGCTCAACCTCAGGGCGATACCCTTCTTTCACGCC
TTGGAATGTGAACCCACATTGCAAATTGGATACCAGCCT
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