DR403775

Overview
NameDR403775
Unique NameDR403775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4121 contig Csv1_Contig4121:57..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403775 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 2
Query:  389 LNLDAAFEQKNEIAKAVEEELEKAMSHYGYEVVQTLIVDIEPDVHVKRAMNXXXXXXXXXXXXXXXXXXXXXLQIKQAEGEAEAKYLSGLGIARQRQAI 685
            +NLD  FEQK E+AK+V EELEK M  YGY +   L+VDI PD  V+RAMN                     LQ+K+AE EAEAKYL G+G+ARQRQAI
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAI 99          
The following BLAST results are available for this feature:
BLAST of DR403775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO4.319e-2052.53Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246D19 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246D19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403775 ID=DR403775; Name=DR403775; organism=Citrus sinensis; type=EST; length=690bp
GGGGATTTGTTTCTTGTTTCTTAAGCAACTCTTCTGCAGGTTGCAGTTTT
GAAAGATGGGTCAAACGTTGGGCTGCATTCAGGTGGAGCAGTCAAAAGTA
GTCATCAGAGAACAATTTGGAAAGTTTGATCATGTGCTTGAACCTCGGTG
TCAATGCTTGCCTTGGTGCCTTGGCTACAAGGTAGCTGGTCGGCTTTCAC
TCCGGGTGCAACAACTGGATGTTAAATGTGAAACAAAGACTAAGGATAAT
GTTTTTGTCAATGTGGTTGCTTCCGTTCAATATCGTGCCTTGGCTGATAA
AGCTTATGATGCTTTCTATAAGCTCTCCAACACCAGGGGCCAAATCCAAG
CCTATGTCTTTGATGTTATCAGGGCAAGCGTACCAAAACTGAACTTAGAT
GCCGCCTTTGAGCAGAAGAATGAAATTGCCAAAGCCGTTGAAGAGGAGCT
CGAAAAGGCCATGTCTCATTATGGGTATGAGGTAGTGCAGACTCTTATTG
TGGATATTGAGCCAGATGTTCATGTAAAGAGAGCAATGAATGAGATCAAT
GCAGCTGCAAGACTGAGGCTGGCAGCAAATGAGAAGGCTGAGGCAGAGAA
GATATTGCAAATCAAACAAGCTGAAGGGGAGGCTGAGGCAAAATACCTGT
CCGGACTTGGGATAGCACGTCAGCGCCAGGCTATTGTTGA
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