DR403773

Overview
NameDR403773
Unique NameDR403773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6285 contig Csv1_Contig6285:5..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR403773 vs. ExPASy Swiss-Prot
Match: U631_ARATH (UPF0631 protein At3g19508 OS=Arabidopsis thaliana GN=At3g19508 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 2 
Query:   14 MDKALRAYATVLRLIRRLPKDTRPYYAKYARENFVNYREVDANDASSLDELFHRAYNHSIWVLNKYKVEESAADKLKDIC 253
            M K LR Y  V+RL+R LP D+RPYYAKYARENFVNYREVD ++ +SLDELF RAYNHS+WVL KY ++ESAA KLK+IC
Sbjct:    1 MKKVLRVYGGVMRLVRLLPADSRPYYAKYARENFVNYREVDQSE-TSLDELFQRAYNHSLWVLKKYSIDESAATKLKEIC 79
The following BLAST results are available for this feature:
BLAST of DR403773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U631_ARATH3.396e-2771.25UPF0631 protein At3g19508 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246D17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246D17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403773 ID=DR403773; Name=DR403773; organism=Citrus sinensis; type=EST; length=580bp
GGGGGAACAGAAAATGGACAAAGCGTTGCGAGCGTACGCTACCGTTCTGA
GGCTGATTCGGCGTTTGCCAAAAGACACGAGACCTTATTATGCCAAATAC
GCCCGCGAAAACTTCGTCAACTATAGAGAAGTTGACGCCAACGATGCCAG
CTCCCTCGATGAGCTCTTCCACAGAGCTTATAATCACTCCATCTGGGTCC
TCAACAAGTATAAGGTAGAAGAATCAGCCGCTGATAAGTTGAAGGATATA
TGTTGCGGTTAAAGCATGCCTACAAGATGTTTGTTCTAATGGCTAAATGA
GTAGTGACGTTCTTGATTTTGCCTTCTTCCTTTGCTAAACGTGATATTTT
ATAGATTTTGGGTTTGATAGCTTGCGTAATGTTTAAGAATAAATTGAGAA
TTTGGTAATGCAGTAAATCGAGTGCAGTTTCCTGCAATGGACCGGAACAG
TCTTGCTTTCTAACTGCTGCAATTCGCAGTCTAAATGCGTTTCATGCACA
GGAAGCTCTACGCGCATCTAATTGTACTACAATAAAGTTTGCTTTTTTAC
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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