DR403770

Overview
NameDR403770
Unique NameDR403770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403770 vs. ExPASy Swiss-Prot
Match: YQEH_BACSU (Uncharacterized protein yqeH OS=Bacillus subtilis GN=yqeH PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  123 AKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEIG-------TWKDRKLKVSGTSWDVNSIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLI 617
            + LYDTPG+++ H M+  +N+ + K++  +KEL+PRT+++   Q ++ GGL R   D  S E      +    + +H  K+ENAD +++ H G  L PP G+D   E         T KD+K             DI  +GLGW ++    +  +T +   G+ + +R  LI
Sbjct:  211 SSLYDTPGIINNHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQTLYFGGLAR--FDYVSGERSPFICYMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DADKKVTAYAPKGVHVFVRRSLI 366          
BLAST of DR403770 vs. ExPASy Swiss-Prot
Match: NOS_ORYSJ (Putative nitric oxide synthase OS=Oryza sativa subsp. japonica GN=Os02g0104700 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 52/193 (26.94%), Postives = 92/193 (47.67%), Query Frame = 3
Query:  126 KLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-IGTWKDRKLKVSGTSWDVNSIDIAAAGLGWFS---LGL---------------KGEASLTLWTYDGIEITLREPLILDRA 629
            KLYDTPG+   H  +  ++ D+   +  +  L+ R +          G ++  GGL+R+D+ +A   T  +T +    + +++     ADE ++  VG+ L PP G+++A   +G    R+L++     D  + DIA +GLGW +   LG+                GE  L +     +EI +R PL + +A
Sbjct:  333 KLYDTPGVHLHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT-RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLPVGKA 524          
The following BLAST results are available for this feature:
BLAST of DR403770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YQEH_BACSU1.862e-1530.81Uncharacterized protein yqeH OS=Bacillus subtilis ... [more]
NOS_ORYSJ8.094e-1126.94Putative nitric oxide synthase OS=Oryza sativa sub... [more]
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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246D13 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246D13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403770 ID=DR403770; Name=DR403770; organism=Citrus sinensis; type=EST; length=688bp
GGGCACCTTAATCAATACATTTTGCGAAAAAAGAAGGGGTGAAAGTTTCA
AAGCTTANNNAAGCTCCAATTCCTGGCACAACACTTGGAATATTGAGAAT
TGGGGGGATTTTGCCAGCCAAGGCTAAGTTGTATGACACCCCAGGACTCT
TACATCCACATCTGATGTCTATGAGATTGAATAGGGATGAGCAGAAAATG
GTTGAAATTCGGAAGGAGCTACAGCCTCGGACATATAGGGTGAAGGGAGG
GCAAGCCGTACATGTTGGTGGCTTAATGAGACTGGACCTTGATCAAGCCT
CAGTGGAAACAATTTACGTGACAGTGTGGGCTTCACCAAATGTTTCCCTA
CACTTGGGGAAAATAGAAAATGCTGATGAAATCTGGAAAAACCATGTTGG
TATCAGATTGCAGCCTCCTATCGGCCAAGACCGAGCTTCTGAGATAGGCA
CATGGAAAGACAGGAAATTGAAAGTGTCTGGAACAAGTTGGGATGTGAAC
AGCATTGACATTGCTGCAGCTGGCTTGGGTTGGTTTTCTTTGGGTCTAAA
AGGTGAAGCATCCTTGACTTTGTGGACATATGATGGCATTGAGATAACCT
TGAGAGAACCTCTCATTCTTGACCGTGCACCATTCCTTGAGAGACCTGGT
TTTTGGCTACCCAAGGCTATATCTGATGCCCTCGGCAG
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