DR403737

Overview
NameDR403737
Unique NameDR403737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig950 contig Csv1_Contig950:14..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METMA (Alanyl-tRNA synthetase OS=Methanosarcina mazei GN=alaS PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 64/216 (29.63%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   58 TKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVE---YKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCG-GCLPHYIPQGSTPRIVKLGDN 693
            TK  +YD   +L+  + ++  F        ++L++T F+ +GGGQP+D G I+  D+ ++  V DV+  +G++ H    EN G E    + KG+ +   VDE RR   +R H+A H+++   +KV   H+       F D   ++   YK   P+     + +++EL AN  +    +V+   +P  EA  + G G     +P G   RIVK+GD+
Sbjct:  511 TKRRFYDEPTRLEFEAVVLDVFDNH-----VVLDNTFFYAEGGGQPADIGTIVAEDTVYR--VVDVQVYEGVILH--TIENPGKEL--AITKGELITGKVDEKRRMTLARHHTATHIVNDAARKVLGKHIWQAGAQKFEDHSRLDLSHYKHISPE-----EIRQIELLANRTVMENKRVVTEWMPRTEAEQVYGFGLYQGGVPPGEKIRIVKVGDD 710          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METBF (Alanyl-tRNA synthetase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=alaS PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 71/242 (29.34%), Postives = 115/242 (47.52%), Query Frame = 1
Query:   10 GEKVLQXEXXNTEVIP----------TKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVE---YKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCG-GCLPHYIPQGSTPRIVKLGDN 693
            GE   + E    EV+P          TK  +YD   +L+  + ++  F  +     ++L++T F+ +GGGQP+D G I  A + +K  V DV+  DG++ H    EN  G    ++ KG  V   VDE RR   +R H+A H+++   +KV   H+       F D   ++   YK   P      + K++EL AN ++    +V+   +   EA    G G     +P G   R+VK+GD+
Sbjct:  485 GELHNKAEEKEEEVVPFADRLKHLPKTKRSFYDEPTRLEFEAVVLDIFDNN-----IVLDNTFFYAEGGGQPADMGTIATAYAVYK--VVDVQVYDGVIVH--TIENPDGNL--DIRKGDIVNGKVDEKRRMTLARHHTATHIVNDAARKVLGTHIWQAGAQKFEDHSRLDLSHYKHISP-----DELKQIELLANRMVMENKRVVTEWMSRTEAEQEYGFGLYQGGVPPGEKIRVVKVGDD 710          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METAC (Alanyl-tRNA synthetase OS=Methanosarcina acetivorans GN=alaS PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 72/242 (29.75%), Postives = 115/242 (47.52%), Query Frame = 1
Query:   10 GEKVLQXEXXNTEVIP----------TKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVE---YKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCG-GCLPHYIPQGSTPRIVKLGDN 693
            GE   + E    EVIP          TK  +YD   +L+  + ++  F        ++L++T F+ +GGGQP+D G I V D  +K  V DV+  +G++ H     +     E E+ KG  +   VDE RR   +R H+A H+++   +KV   H+       F D   ++   YK   P+     + K++EL AN  +    +V+   +P  EA  + G G     +P G   RIVK+GD+
Sbjct:  485 GELHNKAEEKEEEVIPFAERLKHLPKTKRRFYDEPTRLEFEAVVLDVFDNH-----IVLDNTFFYAEGGGQPADIGTISVGDIVYK--VVDVQVYEGVIVHTVDIPDG----ELEITKGDIITGKVDERRRMTLARHHTATHIVNDAARKVLGKHIWQAGAQKFEDHSRLDLSHYKHISPE-----ELKQIELLANRTVMENKRVITEWMPRIEAEQVYGFGLYQGGVPPGEKIRIVKVGDD 710          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METB6 (Alanyl-tRNA synthetase OS=Methanoregula boonei (strain 6A8) GN=alaS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 58/211 (27.49%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   55 PTKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKL 684
            PTK  YY+     +  + +I FF         +L+ T+F+P+GGGQP+DTG ++ +DS  +  V DV     ++ H+     SGG     L++G+ V+  +DE RR    R H+A H+L    + V   H+        P+   ++ +    ++    + +++E+EAN ++     V +++    +A    G  L    +P G   RIVK+
Sbjct:  511 PTKKLYYEQPGDTEFEAVVIDFFD-----EYAVLDQTLFYPEGGGQPADTGSLVGSDSMAR--VDDVIKVGEVILHH----ISGG----VLQRGERVKGMIDEERRFSLMRHHTATHILLHAAKAVLGVHIHQSGAQKGPESSRIDIRHF--KHITPDELRKIEIEANRMVMANRPVEISIENRTKAEQEYGFALYQGGVPPGKDLRIVKV 704          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METMJ (Alanyl-tRNA synthetase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=alaS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 1
Query:   55 PTKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGH-LLDVCMQKVGLGHLEPG--KGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCG-GCLPHYIPQGSTPRIVKLG 687
            PTK  YY+   +++  + ++ +F G       +L+ T+F+P+GGGQPSDTG ++ ++S  +  V++V     ++ H      +GG     L +G  V+  VDE RR    R H+A H LL    Q +G+   + G  KG          Y+   P      + + +ELEAN L+     V + V    +A    G G     +P G   R V++G
Sbjct:  512 PTKKLYYELPNEVEFEAMVLDYFDG-----MAVLDQTLFYPEGGGQPSDTGTLVTSESMVR--VEEVVKLGEVILH----RVTGG----PLMRGDRVKGMVDEERRWSLMRHHTATHVLLHAAQQVLGVHVHQAGAQKGSEVSRLDIRHYRHITP-----DELRRIELEANRLVMADTPVYIHVEERTKAEQKYGFGLYQGGVPPGREIRTVQVG 706          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_SYNAS (Alanyl-tRNA synthetase OS=Syntrophus aciditrophicus (strain SB) GN=alaS PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 66/206 (32.04%), Postives = 93/206 (45.15%), Query Frame = 1
Query:   82 TLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSR-DGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYK--GSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTPRIVKLGD 690
            T  LQ    + S  +G++G   LI+  T F+ + GGQ  DTG I     DF F V D R   D ++ H G      G       KG  V L V E +R+     HSA HLL   M+ V   H++        +    ++     + +NEL+    ++E  ANA+I R   V+  VLP EEA M  G         G   R+V++GD
Sbjct:  477 TALLQKEELVDSLAEGEEGE--LIVAETPFYGEIGGQIGDTGTI--EGEDFVFEVLDTRRPLDNLISHVGRVIKGRGR------KGDSVNLIVAEDKRRATEANHSATHLLQAAMKTVMGNHIKQSGSLVTAERLRFDFTHFSKIEENELE----QIENLANAVIRRNLPVVTRVLPLEEA-MKTGATAVFDEKYGEKVRVVRMGD 667          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METTP (Alanyl-tRNA synthetase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=alaS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 59/209 (28.23%), Postives = 100/209 (47.85%), Query Frame = 1
Query:   70 YYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKLGDN 693
            +Y      +  + ++  F+G     +++L+ T+F+P+GGGQP+D G ++V D    F V DV+  DG+V H    E  G      L  G  V   +D  RR  ++R H+A H+++   ++V   H+         D   ++   S  +     + K +ELEAN  +     V+   +P EEA  L G  L    +P G   R+V++G +
Sbjct:  508 FYYRPFDQEFDATVLGIFEG-----SVVLDRTLFYPEGGGQPADRG-VLVRDGQV-FNVNDVQMIDGVVLHR--VEQEG------LSPGDRVTGRIDMRRRMAHARHHTATHIVNDSAKRVLGRHVWQAGAQKSEDRARLDI--SHYRRISDEELKAIELEANRRVMEMIPVITEFMPREEAERLFGFQLYQGGVPPGREIRVVRVGSD 699          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METHJ (Alanyl-tRNA synthetase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=alaS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 56/213 (26.29%), Postives = 97/213 (45.54%), Query Frame = 1
Query:   58 TKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPG---KGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKL 684
            T+  +Y+    ++  +K++  F G    + ++L+ T+F+P+GGGQP DTG  +  D     +   ++  + I+         GG     + KG  +R  +DE RR    R H+A H+L    ++V   H+      KG +        YK   P+     + K++E+ AN L+       +A     +A    G CL    +P GS  R+VK+
Sbjct:  513 TRKLFYERPGSMEFEAKVLEIFDG----QYVVLDQTLFYPEGGGQPGDTGLFLTPDGLTVRVCDTIKLGESILHRI-----DGG----NVRKGDMIRGILDEDRRLSLMRHHTATHILLHAAKEVLGAHIHQAGAQKGEYSSRIDIRHYKHITPE-----ELKKIEVVANRLVMANSSTSIAWEDRTDAEQKYGFCLYQGGVPPGSRIRVVKV 707          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_METBU (Alanyl-tRNA synthetase OS=Methanococcoides burtonii (strain DSM 6242) GN=alaS PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 59/230 (25.65%), Postives = 109/230 (47.39%), Query Frame = 1
Query:   13 EKVLQXEXXNTEVIPTKLDYYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETEL--EKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKLGDN 693
            EKV+        +  TK  +YD   ++   + ++  F        ++L++T+ +P+GGGQP+D G + V D   K  V D +  DG+V H      +  E E EL   KG  V   V+E RR  ++R H+A H+++   ++V   H+       F D   ++   S  +   Q +  ++E+ AN  + +  +++   +   EA    G  L    +P G   R++++G++
Sbjct:  496 EKVVPFADKIARLPKTKRLFYDEPNRMDFDAVVLEVFDNH-----IVLDNTLMYPEGGGQPADHGTLTVEDVVLK--VVDTQMYDGVVVH------TINEIEDELHIRKGDMVVGRVNEKRRMAHARHHTATHIINDAAREVLGSHIWQTGAQKFADRARLDI--SHYKRITQEEANQIEIIANHTVMKNKRIISDWMDRTEAEQKYGFRLYQGGVPPGKMIRVLQVGND 710          
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_HALWD (Alanyl-tRNA synthetase OS=Haloquadratum walsbyi (strain DSM 16790) GN=alaS PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 56/209 (26.79%), Postives = 97/209 (46.41%), Query Frame = 1
Query:   70 YYDNTLKLQSTSKLISFFKGDDGRRALILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKLGDN 693
            YYD+    +  + ++  F+ D G   ++L+ T+F+P+GGGQP+D G +   +   +  + DV+++DG++ H    EN G        KG  +R  +D  RR+   + H+A H++    +KV   H+         D    +       N +++KT  +E  AN +I +   V        EA    G  L    IP G   R + +GD+
Sbjct:  519 YYDDQTGTEFEAVVLDIFEQDTGYD-IVLDQTMFYPEGGGQPADHGTLTTEEETIE--ITDVKAQDGVILHQAT-ENPG--------KGDFIRGQLDVERRRRLMQHHTATHIIGHAARKVLGDHVRQAGAQKGTDSARFDLTHYERINRIEAKT--IESVANDIIRQNISVRQDWPDRHEAENEHGFDLYQGGIPPGQNIRTITIGDD 713          
The following BLAST results are available for this feature:
BLAST of DR403737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SYA_METMA2.711e-1729.63Alanyl-tRNA synthetase OS=Methanosarcina mazei GN=... [more]
SYA_METBF4.624e-1729.34Alanyl-tRNA synthetase OS=Methanosarcina barkeri (... [more]
SYA_METAC7.887e-1729.75Alanyl-tRNA synthetase OS=Methanosarcina acetivora... [more]
SYA_METB62.626e-1227.49Alanyl-tRNA synthetase OS=Methanoregula boonei (st... [more]
SYA_METMJ3.429e-1229.30Alanyl-tRNA synthetase OS=Methanoculleus marisnigr... [more]
SYA_SYNAS4.479e-1232.04Alanyl-tRNA synthetase OS=Syntrophus aciditrophicu... [more]
SYA_METTP1.702e-1128.23Alanyl-tRNA synthetase OS=Methanosaeta thermophila... [more]
SYA_METHJ2.903e-1126.29Alanyl-tRNA synthetase OS=Methanospirillum hungate... [more]
SYA_METBU3.791e-1125.65Alanyl-tRNA synthetase OS=Methanococcoides burtoni... [more]
SYA_HALWD4.952e-1126.79Alanyl-tRNA synthetase OS=Haloquadratum walsbyi (s... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246B22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246B22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403737 ID=DR403737; Name=DR403737; organism=Citrus sinensis; type=EST; length=700bp
CGGCCGGGGGGAGAAAAAGTCCTGCAGNNNGAAGNNNNGAACACGGAAGT
GATTCCGACAAAGCTAGATTACTACGACAACACGTTAAAGCTCCAATCGA
CTTCCAAACTCATTTCGTTTTTCAAGGGTGATGACGGTAGACGAGCATTG
ATACTAGAGTCTACGATATTTCATCCGCAAGGCGGCGGTCAACCCTCCGA
CACTGGCTTTATCATCGTTGCTGATTCTGATTTCAAGTTCATTGTACAAG
ACGTTCGATCAAGAGATGGGATTGTGTTTCATTATGGGGTTTTTGAGAAT
TCTGGCGGGGAATTTGAAACGGAGTTAGAGAAAGGGAAAGAAGTTCGTTT
ATGGGTAGATGAGTCGAGGCGAAAGCTGAATTCAAGGCTGCACTCAGCTG
GGCATTTGCTGGATGTATGCATGCAAAAGGTTGGATTAGGACATTTAGAG
CCAGGCAAAGGCTACCATTTCCCTGATGGGCCCTATGTTGAGTATAAAGG
CTCTGTTCCACAAAATGAATTACAAAGCAAGACAAAAGAACTAGAGCTTG
AAGCTAATGCATTAATCTCTAGAGGAGGGAAAGTTATGGTTGCTGTATTA
CCATATGAAGAAGCTTCTATGCTTTGTGGTGGCTGCCTTCCCCATTATAT
TCCGCAGGGCAGCACTCCTCGAATTGTGAAATTAGGAGATAATCCTGGTT
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