DR403709

Overview
NameDR403709
Unique NameDR403709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7102 contig Csv1_Contig7102:123..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.326e-31
Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 1
Query:  256 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            QF++    RN     A GF+ Y +FITA   +   GFGTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S   T+PC  G  YYGRG + + WNYNYG  G A+  DLLN+P+ +  +A +AF+AA
Sbjct:   94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAA 238          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  223 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            ++ IS       FE     RN     A GF+ Y++FITAT  +    FGTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S ++  PC PG +Y+GRG I I +NYNYGA G A+  +LLN+P+ +  +A ++F+ A
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTA 157          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1
Query:  256 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            QF++    RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S ++  PC  G  YYGRG + + WNYNYG  G A+ +DLLN+P+ +  +  +AF+AA
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAA 223          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN P   A GF+ Y +F+ A   +    FGTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  PC PG  YYGRG + + WNYNYG  GEAL+ +LL +P+ +  +  L+F+ A
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTA 154          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28
Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSA 205          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28
Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSA 227          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN       GF+ Y +FI A   +   GFGTTG    K KE+ AFLA    +T+ G+  A  GP AWG C+  E +  + YC       +PC PG +YYGRG I +  NYNYG  G+A+K DL+N+P+ +  N T++F+ A
Sbjct:   89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTA 231          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A
Sbjct:   85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSA 227          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            + + F  ++     A GF+ Y SF+ A  ++    F  TG    + +E+ AFLA +  +T+ G+  A  GP AWGLCY  E++P  SYCD + K  +PC PG  Y+GRG I I WN+NYG  G+AL  D L +PE +   + +AF+ A
Sbjct:   58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDK-QWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTA 202          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A
Sbjct:   84 FDQVLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSA 226          
The following BLAST results are available for this feature:
BLAST of DR403709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHIB_ARATH3.326e-3141.61Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHID_SOLLC4.803e-3041.25Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_BRANA4.803e-3040.94Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA5.310e-2940.54Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_GOSHI1.183e-2841.61Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI1.183e-2841.61Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIX_PEA2.231e-2740.54Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHIT_PHAVU2.231e-2740.54Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI10_ORYSJ2.231e-2739.86Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI5_PHAVU2.914e-2740.54Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246A15 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246A15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403709 ID=DR403709; Name=DR403709; organism=Citrus sinensis; type=EST; length=704bp
GGGGAAGTGAATCTCGAAACAACAGGTAGATCTGGTGAGAACGAGAAAAT
GAAGATGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACTAGTAC
TGGCACTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGGTGATA
GTGAAGAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAGTGCCC
AACATGGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTTCCAGG
TTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGGCACAT
GCCGTGGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTCAAATA
TCAGCCCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGATGAAGG
AGATTTGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTGGATAT
GGAGTGGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAACCATGA
AATGAGCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACACATATC
CCTGCACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTATATAC
TGGAACTATAACTATGGAGCCACTGGGGAAGCATTGAAGGCAGATCTGTT
GAATCATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGAGGCTG
CAAT
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