DR403701

Overview
NameDR403701
Unique NameDR403701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR403701_ssr602 microsatellite DR403701_ssr602:602..613. BLAST: Citrus ESTs to Prunus persica proteins V1
DR403701_ssr632 microsatellite DR403701_ssr632:632..649. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1C_ARATH (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana GN=DREB1C PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 7.759e-35
Identity = 82/165 (49.70%), Postives = 98/165 (59.39%), Query Frame = 1
Query:  133 FNYRLATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFR--LSH--------DDEDQFEENGLLPE--KNVFYMDEEAVFDMPGLLVNMAEG 591
            ++ +LATS PKK AGR+ FRETRHPI+RGVR RN+ KWVCELREPNKK+RIWLGT+ T EM             G+SACLNFADSAWRL +P                  F+  + H        D E+   E    PE  ++ FYMDEEA+  M  LL NMAEG
Sbjct:   25 YSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEG 189          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.728e-34
Identity = 79/160 (49.38%), Postives = 95/160 (59.38%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFRLSHDD---EDQFEENGLLPE--------KNVFYMDEEAVFDMPGLLVNMAEG 591
            LA+S PKK AGR+ FRETRHPI+RGVR RN+ KWVCE+REPNKK+RIWLGT+ T EM             G+SACLNFADSAWRL +P                  F+    D   +  F+    L E        +N FYM +EA+F+MP LL NMAEG
Sbjct:   29 LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEG 188          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.948e-34
Identity = 79/171 (46.20%), Postives = 94/171 (54.97%), Query Frame = 1
Query:  142 RLATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFR---------------------LSHDDEDQFEENGLLPEKNVFYMDEEAVFDMPGLLVNMAEG 591
            +LA+S PKKRAGR+ FRETRHPI+RGVR RN+ KWVCE+REPNKKSRIWLGT+PT EM             G+SACLNFADSAWRL +P                  F+                     +   +    E+NG      VFYMD+EA+  MP    NMAEG
Sbjct:   31 KLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNG-----GVFYMDDEALLGMPNFFENMAEG 196          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 8.578e-34
Identity = 81/161 (50.31%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFR--------LSH--DDEDQFEENGLLPEKN--VFYMDEEAVFDMPGLLVNMAEG 591
            LATS PKK AGR+ FRETRHPI+RGVR RN+ KWV E+REPNKK+RIWLGT+ T EM             G+SACLNFADSAWRL +P                  F+         +H  D E+   E    PE++   FYMDEE +F MP LL NMAEG
Sbjct:   26 LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEG 186          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1F_ARATH (Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29
Identity = 57/88 (64.77%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVP 408
            LA   PKKRAGRRVF+ETRHP++RG+R RN +KWVCE+REP  + RIWLGTYPT +M             G+SACLNFADSAWRLPVP
Sbjct:    8 LAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPTADMAARAHDVAVLALRGRSACLNFADSAWRLPVP 95          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1E_ARATH (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DREB1E PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVP 408
            +A   PKKRAGRR+F+ETRHPI+RGVR R+ +KWVCE+REP  + R+WLGTYPT +M             G+SACLNF+DSAWRLPVP
Sbjct:    8 VAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSDSAWRLPVP 95          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1G_ORYSJ (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. japonica GN=DREB1G PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVP 408
            ++++ PK+RAGR  F+ETRHP+F+GVR RN  +WVCE+REP+ K RIWLGT+ T EM             G++ACLNFADS  RL VP
Sbjct:   33 VSSAPPKRRAGRTKFKETRHPVFKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVP 120          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1G_ORYSI (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. indica GN=DREB1G PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:  145 LATSSPKKRAGRRVFRETRHPIFRGVRMRNNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXGKSACLNFADSAWRLPVP 408
            ++++ PK+RAGR  F+ETRHP+F+GVR RN  +WVCE+REP+ K RIWLGT+ T EM             G++ACLNFADS  RL VP
Sbjct:   33 VSSAPPKRRAGRTKFKETRHPVFKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVP 120          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica GN=DREB1F PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22
Identity = 62/156 (39.74%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  160 PKKRAGRRVFRETRHPIFRGVRMR-NNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXG-KSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFR-------LSHDDEDQFEENGLLPEKN---VFYMDEEAVFDMPGLLVNMAEG 591
            PK+RAGR+ FRETRHP++RGVR R   ++WVCE+REP  ++RIWLGTYPTPEM             G + A LNF DS   LP                    +R       L  D ++     G           ++DE+A+FDMPGL+ +MA G
Sbjct:   30 PKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARG 185          
BLAST of DR403701 vs. ExPASy Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22
Identity = 62/156 (39.74%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  160 PKKRAGRRVFRETRHPIFRGVRMR-NNNKWVCELREPNKKSRIWLGTYPTPEMXXXXXXXXXXXXXG-KSACLNFADSAWRLPVPXXXXXXXXXXXXXXXXXXFR-------LSHDDEDQFEENGLLPEKN---VFYMDEEAVFDMPGLLVNMAEG 591
            PK+RAGR+ FRETRHP++RGVR R   ++WVCE+REP  ++RIWLGTYPTPEM             G + A LNF DS   LP                    +R       L  D ++     G           ++DE+A+FDMPGL+ +MA G
Sbjct:   30 PKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARG 185          
The following BLAST results are available for this feature:
BLAST of DR403701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
DRE1C_ARATH7.759e-3549.70Dehydration-responsive element-binding protein 1C ... [more]
DRE1A_ARATH1.728e-3449.38Dehydration-responsive element-binding protein 1A ... [more]
DRE1D_ARATH2.948e-3446.20Dehydration-responsive element-binding protein 1D ... [more]
DRE1B_ARATH8.578e-3450.31Dehydration-responsive element-binding protein 1B ... [more]
DRE1F_ARATH4.871e-2964.77Dehydration-responsive element-binding protein 1F ... [more]
DRE1E_ARATH1.567e-2761.36Dehydration-responsive element-binding protein 1E ... [more]
DRE1G_ORYSJ1.982e-2254.55Dehydration-responsive element-binding protein 1G ... [more]
DRE1G_ORYSI1.982e-2254.55Dehydration-responsive element-binding protein 1G ... [more]
DRE1F_ORYSJ1.982e-2239.74Dehydration-responsive element-binding protein 1F ... [more]
DRE1F_ORYSI1.982e-2239.74Dehydration-responsive element-binding protein 1F ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246A06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403701 ID=DR403701; Name=DR403701; organism=Citrus sinensis; type=EST; length=672bp
GGGGAGACCGAACAAACACAAACAAGTCAAAAGCCCATCAAAAGTCACTT
CTAAAATTTCAAATTAAACTTCATATCAATGGATTGCATATCGAGTCAAG
GCGAGCTGCTCACTCACACTCAGACAACGAAGTTCAACTACAGATTAGCA
ACGAGCAGTCCTAAGAAGCGAGCGGGGCGGAGAGTGTTTAGAGAGACACG
TCATCCGATTTTCAGAGGAGTCAGAATGAGAAACAATAACAAATGGGTAT
GCGAGCTGCGCGAACCCAACAAGAAGTCACGCATTTGGCTAGGTACTTAT
CCTACGCCAGAAATGGCTGCGAGGGCACATGACGTGGCAGCATTGGCCCT
GAGAGGGAAATCCGCGTGCCTGAATTTCGCTGACTCGGCATGGAGGTTGC
CGGTGCCGGCTTCCGCGGATGCTGATGATATAAGAAAGGCTGCAGCTGAG
GCAGCAGAAGCATTCAGGCTGTCCCATGATGATGAAGATCAATTTGAAGA
AAATGGCTTGTTGCCGGAGAAAAATGTGTTTTACATGGATGAAGAGGCGG
TTTTTGATATGCCGGGACTGCTTGTGAACATGGCGGAGGGTTTGCTTCTT
TCACCACCACCACTACTTATTGGATGTGAGTATGATGATGATGATGATGA
TACGAAAGTGGAATGATTATAT
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