CX053797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.017e-80 Identity = 145/160 (90.62%), Postives = 153/160 (95.62%), Query Frame = -3 Query: 344 QADVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 823 QADV+ALQK+ A+RHLIYQHQHNKQMSCP M QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA+DLVKTCFASATERDIYTGD+LEIV+LN GI RE MELRKD Sbjct: 64 QADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIRREEMELRKD 223
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.423e-74 Identity = 136/160 (85.00%), Postives = 146/160 (91.25%), Query Frame = -3 Query: 344 QADVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 823 QADVKALQK+ +RHLIYQHQHNKQMSCP MAQLLSNTLY+KRFFPYY+FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L GI E M+LRKD Sbjct: 64 QADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.573e-73 Identity = 133/160 (83.12%), Postives = 145/160 (90.62%), Query Frame = -3 Query: 344 QADVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 823 Q D+KAL K AAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DAVTPLSE EAVDLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD Sbjct: 62 QGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_DICDI (Proteasome subunit beta type-1 OS=Dictyostelium discoideum GN=psmB1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.258e-38 Identity = 82/160 (51.25%), Postives = 109/160 (68.12%), Query Frame = -3 Query: 344 QADVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 823 QAD ALQK + ++ +H K MS P +AQ LSNTLYYKRFFPYY+FN++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+ + ++ V S + V VK SA ERDIYTGD +IVV++K G+H E EL+ D Sbjct: 80 QADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDV---SCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.461e-35 Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P LDNQ+ + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K GI E + LRKD Sbjct: 84 DCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN----MENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.461e-35 Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P LDNQ+ + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K GI E + LRKD Sbjct: 85 DCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN----MENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PLS A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 88 DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.047e-33 Identity = 72/158 (45.57%), Postives = 100/158 (63.29%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PLS A+ LVK F SA ERD+YTGD L++ ++ K GI E + LRKD Sbjct: 88 DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.898e-33 Identity = 72/158 (45.57%), Postives = 99/158 (62.66%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PL+ A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 87 DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
BLAST of CX053797 vs. ExPASy Swiss-Prot
Match: PSB1_RAT (Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 6.686e-32 Identity = 71/158 (44.94%), Postives = 98/158 (62.03%), Query Frame = -3 Query: 344 DVKALQKLFAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 817 D L K+ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++ GLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PL+ A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 87 DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240 The following BLAST results are available for this feature:
BLAST of CX053797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX053797 ID=CX053797; Name=CX053797; organism=Citrus sinensis; type=EST; length=825bpback to top |