EY692931

Overview
NameEY692931
Unique NameEY692931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5646 contig Csv1_Contig5646:450..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY692931 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.098e-17
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1 
Query:   13 LRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 150
            LRTGAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEALS P G
Sbjct:  104 LRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFG 149
[Close]
BLAST of EY692931 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1 
Query:   13 LRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 150
            LR+GAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEAL+TP+G
Sbjct:  103 LRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMG 148
The following BLAST results are available for this feature:
BLAST of EY692931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
VP321_ARATH7.098e-1793.48Vacuolar protein sorting-associated protein 32 hom... [more]
VP322_ARATH9.270e-1791.30Vacuolar protein sorting-associated protein 32 hom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-A01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692931 ID=EY692931; Name=EY692931; organism=Citrus sinensis; type=EST; length=581bp
CCACGCGTCCGATTGAGGACGGGAGCATCGACAATGAAGGCTATGCAGAA
AGCAACGAACATAGATGATGTGGATAAGACCATGGATGAGATCAATGAGC
AGACCGAGAACATGAAGCAGATTCAAGAAGCATTATCAACTCCTATTGGT
GCTGCTGCTGATTTCGATGAGGATGAATTGGAAGCAGAACTTGAAGAACT
GGAAGGTGCTGAGTTGGAAGAGCAGCTTCTACAGCCAGCTACAACAGCTC
CTGCTGCTCCGGTTCAGGTCCCTGCTGGCAGGCAACAAGCCCGTCCTGTT
CCCCAAAAGCAGCGAACAGCTGAGGAAGATGAGCTTGCTGCTTTACAAGC
TGAGATGGCTCTTTAAGCAGGTTTTACCGCCATAATGAAGATATTATTTA
AATAGCTGGCCGTATAATGTGGAGATTTATGCCTACTTGGATTACCTTCA
AGATTTCTGTGTGCATTCAATGAACAGACTGTATATAAAGTTTGCGTAAA
CTAGTCCTGTTTGAAATATGTATCCTGTATTCTGTCTTATAGACCTTTTA
AATTGAGTCATCATCTTTGATGTGTTTTTTC
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