CX053728

Overview
NameCX053728
Unique NameCX053728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C90A1_ARATH (Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.887e-86
Identity = 152/180 (84.44%), Postives = 169/180 (93.89%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ET QLI AYKTENPEPFID RV R+GS+F TH+FGEPT+FSADPETNRF+LQNEGKLFECSYP SI NLLGKHSLLLMKGSLHKRMHSLTMSFANSSII+DHL++DIDRLVR ++DSW+ RVLLMEEAKKITFELTVKQLMSFDP EW+ESLRKEY+LVIEGFF++PLP+FS TYR+AIQ
Sbjct:   43 ETFQLIGAYKTENPEPFIDERVARYGSVFMTHLFGEPTIFSADPETNRFVLQNEGKLFECSYPASICNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLMLDIDRLVRFNLDSWSSRVLLMEEAKKITFELTVKQLMSFDPGEWSESLRKEYLLVIEGFFSLPLPLFSTTYRKAIQ 222          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C90B1_ARATH (Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.991e-36
Identity = 77/183 (42.08%), Postives = 114/183 (62.30%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLL--MEEAKKITFELTVKQLMSFDP-NEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ET+  +  Y       F+   V ++G I+ +++FGEPT+ SAD   NRFILQNEG+LFECSYP SI  +LGK S+L++ G +H+ M S++++F + + +R  LL D++R     +DSW    +    +EAKK TF L  K +MS DP  E TE L+KEYV  ++G  + PL +    Y +A+Q
Sbjct:   51 ETIGYLKPYTATTLGDFMQQHVSKYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTILLKDVERHTLFVLDSWQQNSIFSAQDEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNLPGTAYHKALQ 233          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 5.776e-27
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVL--LMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPL 870
            ETL  IA   +  P  F+D R   +G +F T+I G P + S D E N+ +LQN G  F  +YP SI+ LLG++S+L + G   KR+H+L  +F  S  ++D +  DI+  V L + SW    L  + +E KK+TFE+ VK LMS  P E    L+ E+   I+G   +P+
Sbjct:   81 ETLNFIACGYSSRPVTFMDKRKSLYGKVFKTNIIGTPIIISTDAEVNKVVLQNHGNTFVPAYPKSITELLGENSILSINGPHQKRLHTLIGAFLRSPHLKDRITRDIEASVVLTLASWAQLPLVHVQDEIKKMTFEILVKVLMSTSPGEDMNILKLEFEEFIKGLICIPI 250          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C724B_ORYSJ (Cytochrome P450 724B1 OS=Oryza sativa subsp. japonica GN=CYP724B1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.681e-26
Identity = 62/190 (32.63%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR---------VLLMEEAKKITFELTVKQLMSFDPNE-WTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ETL+ ++ + +     F++    R+G +F +H+F  PT+ S D E N FILQNE +LF+CSYP  I  +LGK S+L++ G  HKR+ +L ++   S+ ++   L DI+++    + SW  +         +   EEA+K  F + VKQ++   P E  T  + ++++  ++G  + PL I    Y +A+Q
Sbjct:   47 ETLRFLSPHASNTLGSFLEDHCSRYGRVFKSHLFCTPTIVSCDQELNHFILQNEERLFQCSYPRPIHGILGKSSMLVVLGEDHKRLRNLALALVTSTKLKPSYLGDIEKIALHIVGSWHGKSKDKGMVNVIAFCEEARKFAFSVIVKQVLGLSPEEPVTAMILEDFLAFMKGLISFPLYIPGTPYAKAVQ 236          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C90D2_ORYSJ (Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.406e-25
Identity = 62/183 (33.88%), Postives = 108/183 (59.02%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGS-IFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEE--AKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ETL+ ++   +  PE F+D R K  GS +F +H+FG  TV +AD E +RF+LQ++ + F   YP S++ L+GK S+LL+ G+L +R+H L  +F  SS ++  L  D+ R +   + S+ D  LL  +  AK + FE+ V+ L+  +  E  + L++++   I G  ++P+ +      R++Q
Sbjct:   61 ETLEFVSCAYSPRPEAFVDKRRKLHGSAVFRSHLFGSATVVTADAEVSRFVLQSDARAFVPWYPRSLTELMGKSSILLINGALQRRVHGLVGAFFKSSHLKSQLTADMRRRLSPALSSFPDSSLLHVQHLAKSVVFEILVRGLIGLEAGEEMQQLKQQFQEFIVGLMSLPIKLPGTRLYRSLQ 243          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C87A3_ORYSJ (Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24
Identity = 63/183 (34.43%), Postives = 101/183 (55.19%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTVKQLMSFDPNEWTE-SLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ETLQ  A   T +  PF+  R+KR+GSIF T + G P V SADPE N ++ Q EGKLFE  YP + + + G+ ++  + G ++K + +L +       ++  LL + D   R  + SW  +  V L E    + F+LT K+L+ +DP++ ++ +LRK +   I G  + PL I    Y   ++
Sbjct:   83 ETLQFFAPNPTCDLSPFVKERIKRYGSIFKTSVVGRPVVVSADPEMNYYVFQQEGKLFESWYPDTFTEIFGRDNVGSLHGFMYKYLKTLVLRLYGQENLKSVLLAETDAACRGSLASWASQPSVELKEGISTMIFDLTAKKLIGYDPSKPSQVNLRKNFGAFICGLISFPLNIPGTAYHECME 265          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C72B1_PINTA (Abietadienol/abietadienal oxidase OS=Pinus taeda GN=CYP720B1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.020e-23
Identity = 53/183 (28.96%), Postives = 97/183 (53.01%), Query Frame = 1
Query:  367 ETLQLIAAYKTENPEPFIDVRVKRFGS-IFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            ET     +  +  P  FID R KR+ S +F +H+FG   V S+DP+ N+++LQNEG+ F+  YP ++  L+G + LL + G L +++H + ++      ++   + +I  LV   +D W D+  + L  E  ++   L  KQL+   P++ T  + + +V        +P+ I   TY + ++
Sbjct:   57 ETYSYYRSMTSNRPRQFIDDREKRYDSDVFVSHLFGSQAVISSDPQFNKYVLQNEGRFFQAHYPKALKALIGDYGLLSVHGDLQRKLHGIAVNLLRFERLKFDFMEEIQNLVHSTLDRWVDKKEIALQNECHQMVLNLMAKQLLDLSPSKETNEICELFVDYTNAVIAIPIKIPGSTYAKGLK 239          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C85A_PHAVU (Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.874e-23
Identity = 55/165 (33.33%), Postives = 93/165 (56.36%), Query Frame = 1
Query:  415 FIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVL-LMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            F+  +  R+GS F +HI G PT+ S DPE NRFIL NE K     YP S+ ++LG  ++  + GS HK M    +S  + ++IRD LL  ID  +R H+  W ++V+ + E+ K++ F  ++KQ+   + +   +    E+  ++ G  ++P+ +    YR  +Q
Sbjct:   57 FMKNKRARYGSFFKSHILGCPTIVSMDPELNRFILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLMDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSIAQPFMTEFFKLVLGTLSLPINLPRTNYRGGLQ 221          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C85A1_SOLLC (Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CYP85A1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.511e-22
Identity = 53/158 (33.54%), Postives = 89/158 (56.33%), Query Frame = 1
Query:  436 RFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVL-LMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            R+GS F +HI G PT+ S D E NR+IL NE K     YP S+ ++LGK ++  + GS HK M    +S  + ++IRD LL  ID  +R H+ +W ++V+ + E+  K+ F  ++KQ+   +     +    E+  ++ G  ++P+ + +  Y R  Q
Sbjct:   64 RYGSFFKSHILGCPTIVSMDSELNRYILVNEAKGLVPGYPQSMIDILGKCNIAAVNGSAHKYMRGALLSLISPTMIRDQLLPKIDEFMRSHLTNWDNKVIDIQEKTNKMAFLSSLKQIAGIESTSLAQEFMSEFFNLVLGTLSLPINLPNTNYHRGFQ 221          
BLAST of CX053728 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.055e-20
Identity = 53/173 (30.64%), Postives = 90/173 (52.02%), Query Frame = 1
Query:  397 TENPEPFIDVRVKRFGSIFTTHIFGEPT-VFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSHTYRRAIQ 906
            T  P  FI  R +R+G IF +++FG    V S DPE N+ +LQ+EG+ F+ +YP  + NL+GK+ LL + G L +++H   ++      +    + DI  L+ + +  W  +  + L EE  ++   L  KQL+   P++ TE + + +    E    VP+ I    Y R  +
Sbjct:   67 TAQPRQFIQEREQRYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQRKLHGAAVNLLRFERLSVDFMEDIQNLLHITLAKWEAKRDIHLQEECHQLVLNLMAKQLLDLSPSKDTEEICEAFGHFSEALLAVPIKIPGTKYARGFK 239          
The following BLAST results are available for this feature:
BLAST of CX053728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
C90A1_ARATH1.887e-8684.44Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CY... [more]
C90B1_ARATH3.991e-3642.08Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CY... [more]
C90C1_ARATH5.776e-2738.82Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=RO... [more]
C724B_ORYSJ1.681e-2632.63Cytochrome P450 724B1 OS=Oryza sativa subsp. japon... [more]
C90D2_ORYSJ5.406e-2533.88Cytochrome P450 90D2 OS=Oryza sativa subsp. japoni... [more]
C87A3_ORYSJ1.204e-2434.43Cytochrome P450 87A3 OS=Oryza sativa subsp. japoni... [more]
C72B1_PINTA1.020e-2328.96Abietadienol/abietadienal oxidase OS=Pinus taeda G... [more]
C85A_PHAVU3.874e-2333.33Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 ... [more]
C85A1_SOLLC2.511e-2233.54Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CY... [more]
C72B2_PINTA1.055e-2030.64Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_7H02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7H02-P4-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053728 ID=CX053728; Name=CX053728; organism=Citrus sinensis; type=EST; length=908bp
TTTTTCAGAAACCTCTATAGATTCTCATCAAATACCCCCTCGTGTGCCTG
TGCTTGCACCCTGTGTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTTTCT
CTTCACTTTCACACGACTCTCCTCTGATAACAATATTTTTCCTATAAACA
TTCACTCTCACTTAGCATGTAATTCTCTAACCGTACCAATAATAATATAC
GGATAACAAGCTAGTTAATTTTCTTATTTCCATGGCGGGTCTTACTCTTG
TCTATGATCTTGTTCTTTATATTTCCATTTCCACAATCATTTTCTTTATT
ATAAAAAGGTCCCGGAGCCGGCGGCTGCGGTTGCCGCCGGGAAGCCTCGG
CCTGCCCTTTCTTGGGGAGACCTTGCAACTCATAGCTGCATACAAAACTG
AGAACCCGGAGCCCTTCATTGATGTGAGGGTGAAGCGGTTCGGTTCGATA
TTCACAACCCACATATTTGGCGAGCCGACGGTGTTCTCCGCCGACCCGGA
AACGAACCGGTTCATCTTGCAGAATGAAGGGAAGTTGTTCGAGTGCAGCT
ACCCCGGCTCGATATCGAACCTTCTGGGGAAGCACTCGTTGCTGCTGATG
AAGGGGAGTCTTCATAAGAGAATGCATTCTTTAACTATGAGCTTCGCTAA
TTCGTCGATCATTAGAGACCATCTTTTGGTCGACATAGACCGGCTGGTCC
GGCTCCATATGGATTCCTGGACCGACCGGGTCCTTCTCATGGAAGAAGCC
AAGAAGATAACATTTGAGTTAACAGTGAAGCAGCTGATGAGTTTTGATCC
GAATGAATGGACCGAGAGTCTCAGAAAAGAATACGTGCTTGTCATCGAAG
GCTTCTTCACTGTTCCTTTGCCCATCTTCTCCCACACATATCGCAGAGCT
ATACAAGC
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