CX053705

Overview
NameCX053705
Unique NameCX053705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.346e-85
Identity = 141/173 (81.50%), Postives = 158/173 (91.33%), Query Frame = -1
Query:  297 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 815
            SLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVD
Sbjct:  178 SLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVD 350          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.149e-83
Identity = 139/173 (80.35%), Postives = 157/173 (90.75%), Query Frame = -1
Query:  297 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 815
            SLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG DG +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVD
Sbjct:  181 SLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVD 353          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.430e-81
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = -1
Query:  297 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVD 812
            LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+DG  CKFDKSKI A+V NFSV+S DE Q++ANL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVD
Sbjct:  184 LSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVD 357          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.851e-81
Identity = 136/174 (78.16%), Postives = 155/174 (89.08%), Query Frame = -1
Query:  297 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 815
            SLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG DG SCKFDKSK+ A+VSNFSV++ DEDQ+AANLVK+GPLAV INA WMQTY+ GVSCPY+C K  LDHGVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVD
Sbjct:  178 SLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDG-SCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVD 350          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.966e-44
Identity = 88/173 (50.87%), Postives = 110/173 (63.58%), Query Frame = -1
Query:  300 SLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 815
            SLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+  +AV  Q YIGGV         LDHG+LIVGY +     I  K  PYWI+KNSWG +WGE GY  +  G+N CGV
Sbjct:  164 SLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGV 334          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.248e-39
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = -1
Query:  297 GPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 542
            GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYGS+G+APIR KEKPYW+IKNSWGENWGENGYYKIC GRN+CGVD
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVD 82          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.844e-34
Identity = 80/174 (45.98%), Postives = 107/174 (61.49%), Query Frame = -1
Query:  300 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 809
            SEQ+L+DCD         + DS CNGGLM++A++ I   GG+E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV
Sbjct:  442 SEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKN-QCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV 604          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33
Identity = 75/176 (42.61%), Postives = 107/176 (60.80%), Query Frame = -1
Query:  297 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 815
            SLSEQQLVDCD           D GCNGGL ++A+E I+K GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+ +Q Y  G+S P+   C KYL DH VL+VGYG S       K +P+WI+KNSWG  WGENGY+++  G   CG++
Sbjct:  151 SLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNE-KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGIN 310          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.253e-31
Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = -1
Query:  297 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 815
            +LSEQQL+DCD         S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +VS+    I  +E+ +   L+  GP+A+ I+A  + TY  G+   + C    L+H VL+VGYG+ G          YW +KNSWG +WGE+GY+++    N CG++
Sbjct:  172 NLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII--HFCENLGLNHAVLLVGYGTEGGV-------SYWTLKNSWGSDWGEDGYFRVKRNINACGLN 327          
BLAST of CX053705 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31
Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = -1
Query:  327 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 815
            SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV     CG  LDHGV++VGYGS+         + YWII+NSWG NWG++GY K+
Sbjct:  176 SLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVKL 327          
The following BLAST results are available for this feature:
BLAST of CX053705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
A494_ARATH1.346e-8581.50Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
RD19A_ARATH2.149e-8380.35Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP1_MAIZE3.430e-8178.29Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP_PEA5.851e-8178.16Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP1_DICDI1.966e-4450.87Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
PAPA5_CARPA3.248e-3982.93Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
CPR1_DROME1.844e-3445.98Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL_SCHMA4.543e-3342.61Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATV_NPVAH7.253e-3141.14Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CPR1_ARATH9.473e-3143.11Probable cysteine proteinase At3g19400 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_7F10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7F10-L20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053705 ID=CX053705; Name=CX053705; organism=Citrus sinensis; type=EST; length=815bp
TTTTTTTTTTTTTTTTTAAAAAGAAAATATTAATACCATCTTCAATAACA
ATTCTGTAGCATGGTTAACTATAAAATGGATAAATATTACATTCTGACAT
GACATATGCTTAAATATTACAAGAGCATATAAAGTTCATGCCTCAGCCCA
CGCATGTAGGCATCCTTATAATTGCAGACGGCTATTTAAAAGGATATCCT
ATAATATCTTCGTATATAAGCTCCACTTGCCTAGCACAACCTCCATAATG
TCTAGCTTGAGGTTGTATGGACAGCAGCTACAGATGAGACCATGGAGTCG
ACCCCACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCC
CCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTGA
AACGGATCGGGGCGAAACCTGAAGATCCATAGCCCACGATAAGCACTCCA
TGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATA
TGTTTGCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTCA
CCAAATTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAATTA
GATACAGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAACCACCGTC
GGTCCCAGTGTAAGGGTAGTCCTTCTCTCGCTCAACCCCACCAGCCTTGA
GTATGTACTCAAAGGCAGAGTTCATTAGCCCACCATTGCACCCAGAGTCA
CATGAACCAGATTCCTCTGGATCACACTCGTGATCACAGTCCACAAGCTG
TTGCTCACTGAGGCT
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