CX053680

Overview
NameCX053680
Unique NameCX053680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 3.245e-78
Identity = 142/200 (71.00%), Postives = 163/200 (81.50%), Query Frame = 2
Query:  170 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQNDSNRHIS 769
            +PPFLSK YDMV+DP T+D+VSWSS NNSF+VW V EF++  LPKYFKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQK +LKSI RRKPAQV   QQP++Q+SSVGACVEVGK+GLEEEVE L+RDKNVLMQELVRLRQQQQ T+  L  VG              SFLAKA+ SP FL+Q  QQ N++N+HIS
Sbjct:   21 IPPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFSQQSNEANQHIS 220          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.967e-76
Identity = 145/201 (72.14%), Postives = 163/201 (81.09%), Query Frame = 2
Query:  170 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQV-HGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQ-QNDSNRHI 766
            +PPFLSK YDMV+DP TN++VSWSS NNSF+VW   EFS+ LLPKYFKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRG+K LLKSI RRKP+ V   QQQ ++Q+SSVGACVEVGK+G+EEEVE LKRDKNVLMQELVRLRQQQQAT+ QL  VG              SFLAKA+ SP FL+QLVQQ  ND NR I
Sbjct:   25 VPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDGNRQI 225          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.154e-75
Identity = 145/211 (68.72%), Postives = 164/211 (77.73%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQQ------------QPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQNDSNRHIS 769
            PPFL K YDMV+DPST+ IVSWS +NNSF+VW   EF++DLLPKYFKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQKHLLKSISRRKPA  H QQ            QP   ++SVGACVEVGK+GLEEEVE LKRDKNVLMQELVRLRQQQQ+TD QL  +               SFLAKA++SP FL+Q VQQQN+SN+ I+
Sbjct:   40 PPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGHAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQGMVQRLQGMELRQQQMMSFLAKAVNSPGFLAQFVQQQNESNKRIA 250          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.969e-75
Identity = 145/211 (68.72%), Postives = 163/211 (77.25%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQQ------------QPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQNDSNRHIS 769
            PPFL K YDMV+DPST+ IVSWS +NNSF+VW   EF++DLLPKYFKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQKHLLKSISRRKPA  H QQ            QP   ++SVGACVEVGK+GLEEEVE LKRDKNVLMQELVRLRQQQQATD QL  +               SFLAKA++ P FL+Q VQQQN+SN+ I+
Sbjct:   38 PPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGNAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAVNRPGFLAQFVQQQNESNKRIA 248          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.728e-75
Identity = 138/199 (69.35%), Postives = 158/199 (79.40%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQ-QQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQNDSNRHI 766
            PPFL K Y+MV+DP+T+ +VSW   NNSF+VW   EF+RDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQKHLLK+I+RRKP   + Q QQP+L  + V ACVEVGK+G+EEE+E+LKRDKNVLMQELVRLRQQQQ TD QL T+G              SFLAKAMHSP FL+Q VQQ  +S R I
Sbjct:   36 PPFLMKTYEMVDDPATDAVVSWGPGNNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENSRRRI 234          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 2.843e-74
Identity = 147/207 (71.01%), Postives = 163/207 (78.74%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQ-----QQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQ---QQNDSNRHIS 769
            PPFLSK YDMV+D +T+ IVSWS++NNSFIVWK  EF+RDLLPK FKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQKHLL+SI+RRKPA   GQ     Q    QNSSV ACVEVGK+GLEEEVE LKRDKNVLMQELVRLRQQQQ+TD QL T+               SFLAKA+ SP FLSQ +Q   QQN+SNR IS
Sbjct:   36 PPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQGHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFLQQQNQQNESNRRIS 242          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.475e-72
Identity = 140/209 (66.99%), Postives = 158/209 (75.60%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHG--QQQPKLQNSSVG--------ACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQNDSNRHIS 769
            PPFLSK YDMVEDP+T+ IVSWS +NNSFIVW   EFSRDLLPKYFKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQKHLLK ISRRK  Q HG     P+ Q  S G        +CVEVGK+GLEEEVE LKRDKNVLMQELV+LRQQQQ TD +L  +               SFLAKA+ +P+FLSQ +Q+Q DSN H++
Sbjct:   51 PPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQTDSNMHVT 259          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.282e-58
Identity = 117/194 (60.31%), Postives = 141/194 (72.68%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQ-QQPKL--QNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQ 745
            PPFL+K YD+VED  TN +VSWS SNNSFIVW    FS  LLP++FKH+NFSSFVRQLNTYGFRKV+PDR+EFANEGFLRGQKHLLK+I RRK +    Q QQP+   Q S    C+EVG+YGL+ E++ L+RDK VLM ELVRLRQQQQ+T   L  +               SFLA+AM +P F+ QLV+Q+
Sbjct:   60 PPFLTKTYDLVEDSRTNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKTSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQK 253          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.871e-58
Identity = 112/191 (58.64%), Postives = 139/191 (72.77%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQ 745
            PPFLSK Y+MVED ST+ ++SWS++ NSFIVW   +FS  LLP++FKHSNFSSF+RQLNTYGFRKVDPDR+EFANEGFL GQKHLLK+I RR+     GQ    +     GAC+E+G YG+EEE+E LKRDKNVLM E+V+LRQQQQ+T  Q+  +G              SFLAK   +P+FL Q + +Q
Sbjct:   30 PPFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNV---GQ---SMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDKQ 214          
BLAST of CX053680 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = 2
Query:  173 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRYEFANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGXXXXXXXXXXXXXXSFLAKAMHSPSFLSQLVQQQ 745
            PPFL+K YD+VEDP+T+ +VSWS + NSF+VW    F+  LLP+ FKH+NFSSFVRQLNTYGFRKVDPDR+EFANEGFLRGQ+HLLK+I RRKP        P  Q  S+ +C+EVG++G EEE++ LKRDKN+L+ E+V+LRQ+QQAT   +  +                FLA+AM +P F  QL QQ+
Sbjct:   41 PPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPP----SNAPPSQQQSLTSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQQLAQQK 227          
The following BLAST results are available for this feature:
BLAST of CX053680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
HFA1E_ARATH3.245e-7871.00Heat stress transcription factor A-1e OS=Arabidops... [more]
HFA1B_ARATH3.967e-7672.14Heat stress transcription factor A-1b OS=Arabidops... [more]
HSF8_SOLPE1.154e-7568.72Heat shock factor protein HSF8 OS=Solanum peruvian... [more]
HSF8_SOLLC1.969e-7568.72Heat shock factor protein HSF8 OS=Solanum lycopers... [more]
HSFA1_ORYSJ5.728e-7569.35Heat stress transcription factor A-1 OS=Oryza sati... [more]
HFA1D_ARATH2.843e-7471.01Heat stress transcription factor A-1d OS=Arabidops... [more]
HFA1A_ARATH3.475e-7266.99Heat stress transcription factor A-1a OS=Arabidops... [more]
HFA6B_ARATH1.282e-5860.31Heat stress transcription factor A-6b OS=Arabidops... [more]
HSF30_SOLPE4.871e-5858.64Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
HFA2C_ORYSJ1.567e-5656.02Heat stress transcription factor A-2c OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_7E04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7E04-J8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053680 ID=CX053680; Name=CX053680; organism=Citrus sinensis; type=EST; length=769bp
AAATGCTCTTTGTTTTTAATCATTTTATGCCATTCTCTCTGTTGTACAAA
TAAAAATTTGCAAAAAATAAATAAAATAAATAAACCCAATCAGTCACTCA
CTGTAAGCTGATCGAGAAGGAAAAAAAATGGAGTCCATGTCGAGTTCATC
AGCGGCAAACGGCAATTCGCTGCCGCCGTTTCTGAGCAAAATCTACGACA
TGGTGGAAGACCCTTCCACGAACGACATCGTTTCGTGGAGTAGTAGTAAT
AACAGCTTTATTGTTTGGAAAGTTGCTGAGTTTTCCAGGGACCTGTTGCC
TAAGTATTTCAAGCACAGTAACTTCTCGAGCTTTGTCCGCCAGTTGAATA
CTTATGGATTTAGGAAAGTTGACCCAGATCGGTATGAATTTGCAAATGAG
GGATTTCTTAGAGGTCAGAAACACCTTTTGAAGAGTATTAGCAGGCGAAA
ACCAGCTCAAGTACATGGTCAGCAACAACCTAAACTTCAGAACTCATCAG
TCGGGGCATGTGTTGAAGTAGGGAAGTATGGACTTGAAGAAGAGGTTGAA
ATACTTAAGCGCGACAAGAATGTTCTCATGCAAGAACTTGTTAGGTTGAG
GCAGCAGCAGCAAGCTACGGATCGTCAATTGCATACTGTTGGACAGCGTG
TACAGGTGATGGAACAACGACAGCAACAAATGATGTCATTTCTTGCCAAG
GCCATGCATAGTCCAAGCTTCTTAAGCCAGCTTGTACAGCAGCAGAATGA
CAGCAACAGGCATATTTCT
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