CX053679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053679 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16 Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = -3 Query: 313 SSAISEIQCSPCVSDS--------VKVNPTQEKSKHNSGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSIDADAFSPDHDVDVSPDGIHKLPRIDDAFWEEFLTASPLPGDTDEINSSPLESGMTSELEQQPEQANGWDNFQHMDHLTEQMGLLTS 810 S++ +IQC P V D+ + P+ K+ D + FP LQ I +E + IP F + G +L P D ++ I+ D + D KLP I D+FWE+FL ASPL D DE++S L+ +++ +Q NGW ++M +LTEQMGLL+S Sbjct: 345 STSTPQIQC-PVVLDNGIPKEVPNMSAVPSVPKAVAPGPTDINILEFPDLQDIVAEENVDIPGGGFEMPGPEGVFSL-PEEGDDSVPIETDEILYNDDTQ-------KLPAIIDSFWEQFLVASPLSVDNDEVDSGVLD-------QKETQQGNGWTKAENMANLTEQMGLLSS 502
BLAST of CX053679 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-14 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = -3 Query: 301 PQLQGIASESTISIPDVNFVLSGNGNAENLDP--TALDGTMSIDADAFSPDHDVDVSPDGIHKLPRIDDAFWEEFLTASPLPGDTDEINSSPLESGMTSE-LEQQPEQANGWDNFQHMDHLTEQMGLLTSESRR 693 P QG A+ + S + V N E LDP LDG + ++AD + LP + D+FWE+F+ SP+ G+TDE+ S +E+ + E LE Q +N W Q M+HLTEQMGLLTS++ R Sbjct: 349 PPTQGAAASGSSSS---DLVGCETDNGECLDPIMAVLDGALELEADTLN------------ELLPEVQDSFWEQFIGESPVIGETDELISGSVENELILEQLELQSTLSNVWSKNQQMNHLTEQMGLLTSDALR 467
BLAST of CX053679 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.499e-13 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = -3 Query: 325 SGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSIDADAFSPDHDVDVSP---DGIHKLPRIDDAFWEEFLTASPLPGDTDEINSSPLESGMTSELEQQPEQANGWDNFQHMDHLTEQMG 723 S +D ++P QLQGI E+ + G +D A++G M +D + SP D+D D I + P + D FWE+FL + P + ++ +++ E +P Q NGWD Q+M+HLTEQMG Sbjct: 398 SASDMIMPELSQLQGILPENNTDVI---------GCDSFMDTIAVEGKMGLDIGSLSPGADIDWQSGLLDEIQEFPSVGDPFWEKFLQSPSSP-------DAAMDDDISNTSETKP-QINGWDKTQNMEHLTEQMG 516
BLAST of CX053679 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.608e-12 Identity = 64/182 (35.16%), Postives = 91/182 (50.00%), Query Frame = -3 Query: 301 PSSAISEI---QCSPCVSDSVKVNPTQEKSKHNSGNDTVLPNFPQ--LQGIASESTISIPDVNFVLSGNGNAENLDP--TALDGTMSIDADAFSPDHDVDVSP--DGIHKLPRIDDAFWEEFLTAS-PLPGDTDEINSSPLESGMTSELEQQPEQANGWD-NFQHMDHLTEQMGLLTSESRR 813 PSS +S + + SP S + H+ V PN Q QG A + S P+ + V + E DP LD + + DA SP+ + ++ +G+ KLP I D FWE+F + P DTD+I S +E+ LEQ+P N W N Q M +LTEQMGLL+SE++R Sbjct: 307 PSSRVSGVTLAEFSPNTVQSATNQVPEASLAHHPQAGLVQPNIGQSPAQGAAPADSWS-PEFDLVGCETDSGECFDPIMAVLDES---EGDAISPEGEGKMNELLEGVPKLPGIQDPFWEQFFSVELPAIADTDDILSGSVENN-DLVLEQEP---NEWTRNEQQMKYLTEQMGLLSSEAQR 480
BLAST of CX053679 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11 Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = -3 Query: 325 SGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSID--ADAFSPDHDVDVSP---DGIHKLPRIDDAFWEEFLTASPLPGDTDEINSSPLESGMTSELEQQPEQANGWDNFQHMDHLTEQMG 723 S +D ++P QLQGI E+ + G +D +A++G + +D SP D+D D I + P + D FWE+FL + P + ++ +++ E +P Q NGWD Q+M+HLTEQMG Sbjct: 396 SASDMIMPELSQLQGILPENNTDVI---------GCDSFMDTSAVEGKVGLDIIGSCLSPGADIDWQSGLLDEIEEFPSVGDPFWEKFLQSPCSP-------DAAMDDDISNTSETKP-QINGWDKTQNMEHLTEQMG 516 The following BLAST results are available for this feature:
BLAST of CX053679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX053679 ID=CX053679; Name=CX053679; organism=Citrus sinensis; type=EST; length=851bpback to top |