DR403565

Overview
NameDR403565
Unique NameDR403565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.332e-70
Identity = 129/157 (82.17%), Postives = 142/157 (90.45%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREYWSHLHSAES 472
            GTVR+N  PL QH+D EIWEVL KC L E V+EKENGLDSLVVEDGSNWSMGQ QLFCLGRA+LRRSR+LVLDEATASIDNATD+ILQKTIR EFADCTVITVAHRIPTVMDCTMVL+ISDG++ EYDEPMKLMK E SLF +LV+EYWSH +SA+S
Sbjct: 1232 GTVRFNLDPLCQHSDAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEYWSHYNSADS 1388          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.181e-47
Identity = 91/155 (58.71%), Postives = 118/155 (76.13%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREYWSHLHSA 466
            GT+R N  PL ++TD +IWE L KC LG+ VR+KE  LDS V E+G NWSMGQ QL CLGR LL+RS+ILVLDEATAS+D ATD ++QKT+R  F+DCTVIT+AHRI +V+D  MVL +S+G + EYD P++L++ + S F +LV EY S   S+
Sbjct: 1358 GTMRSNLDPLEEYTDDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRISSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVAEYTSRSSSS 1512          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 86/148 (58.11%), Postives = 116/148 (78.38%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GT+R N  PL+Q+TD+EIWE L KC LG+ +R K+  LD+ VVE+G NWS+GQ QL CLGR LL++S ILVLDEATAS+D+ATD ++QK I  EF D TV+T+AHRI TV++  +VL +SDG++AE+D P KL++ E S F +L++EY
Sbjct:  875 GTIRLNLDPLAQYTDREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY 1022          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.349e-46
Identity = 85/148 (57.43%), Postives = 115/148 (77.70%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GT+R N  PL+Q+TD EIWE + KC LG+ +R K+  LD+ VVE+G NWS+GQ QL CLGR LL++S ILVLDEATAS+D+ATD ++QK I  EF D TV+T+AHRI TV++  +VL +SDG++AE+D P KL++ E S F +L++EY
Sbjct: 1328 GTIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY 1475          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.785e-45
Identity = 87/150 (58.00%), Postives = 116/150 (77.33%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREYWS 451
            GT+R N  PL +H+D +IWE L K  LG+ VR K+  LDS V+E+G NWS+GQ QL  LGRALL++++ILVLDEATAS+D ATD ++QK IR EF DCTV T+AHRIPTV+D  +VL +SDG++AE+D P +L++ + S+F +LV EY S
Sbjct: 1357 GTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSS 1506          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.396e-44
Identity = 90/151 (59.60%), Postives = 111/151 (73.51%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVED-GSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREYWS 451
            G +R N  PL  ++D EIW+ L KC L   +    N LDS  V D G NWS+GQ QLFCLGR LL+R++ILVLDEATASID+ATD I+Q+ IR EFADCTVITVAHR+PTV+D  MV+ +S G L EY+EP KLM+ + S F +LV EYW+
Sbjct: 1134 GCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETD-SYFSKLVAEYWA 1283          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 8.354e-44
Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GT+R N  PL ++TD +IWE L  C LG+ VR+KE  LDS V E+G NWS+GQ QL CLGR LL+RS++LVLDEATASID ATD ++Q+T+R  FADCTVIT+AHRI +V+D  MVL +  G + E+D P +L++   SLF + V EY
Sbjct: 1308 GTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLLEDRSSLFSKFVAEY 1455          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.091e-43
Identity = 84/148 (56.76%), Postives = 111/148 (75.00%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GTVR N  P  +++D+EIW+ L +C L + V  K   LDSLV ++G NWS+GQ QL CLGR +L+RSRIL LDEATAS+D+ TD ++QK IR +F+DCT+I++AHRIPTVMDC  VL I  GK  EYD P++L++ + SLF  LV+EY
Sbjct: 1386 GTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQ-SLFAALVQEY 1532          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 81/148 (54.73%), Postives = 110/148 (74.32%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GTVR N  PL ++ D +IWE L KC LG+ +R+KE  LDS V E+G NWS+GQ QL CLGR LL+RS++L+LDEATAS+D ATD ++Q+T+R  F+ CTVIT+AHRI +V+D  MVL +  G + E+D P +L++ + S F +LV EY
Sbjct: 1330 GTVRSNLDPLEEYADDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVAEY 1477          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.021e-41
Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREY 445
            GTVR N  P  Q++D+EIW+ L +C L + V  K   LDSLVV++G NWS+GQ QL CLGR +L+RSR+L LDEATAS+D+ TD ++QK IR +FA CT+I++AHRIPTVMD   VL I  GK  E+D P +L++   SLF  LV+EY
Sbjct: 1363 GTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLE-RPSLFAALVQEY 1509          
The following BLAST results are available for this feature:
BLAST of DR403565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
AB10C_ARATH2.332e-7082.17ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB3C_ARATH6.181e-4758.71ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB15C_ARATH1.054e-4658.11Putative ABC transporter C family member 15 OS=Ara... [more]
AB9C_ARATH2.349e-4657.43ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB5C_ARATH5.785e-4558.00ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB8C_ARATH6.396e-4459.60ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB6C_ARATH8.354e-4457.43ABC transporter C family member 6 OS=Arabidopsis t... [more]
AB14C_ARATH1.091e-4356.76ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB7C_ARATH1.206e-4254.73ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB4C_ARATH1.021e-4156.08ABC transporter C family member 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241I03 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241I03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403565 ID=DR403565; Name=DR403565; organism=Citrus sinensis; type=EST; length=742bp
GGGGACCGTGAGATATAATTNNNNNCCCTTGTCGCAACATACAGACCAGG
AAATATGGGAGGTTCTTGCAAAGTGTCATCTTGGAGAGGCTGTCCGCGAG
AAAGAAAATGGCCTAGACTCCTTAGTTGTGGAAGACGGATCAAACTGGAG
TATGGGGCAATGGCAACTGTTCTGTTTGGGCCGTGCTCTTTTGAGGAGAA
GCCGCATATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACT
GACATGATTCTGCAGAAAACTATTCGTGCAGAATTTGCTGATTGCACTGT
TATCACAGTAGCTCACAGGATTCCAACAGTGATGGATTGCACTATGGTAC
TTGCCATTAGTGATGGTAAACTAGCGGAGTATGATGAGCCAATGAAGTTA
ATGAAGATGGAAGGTTCACTCTTCAGGCAGCTAGTAAGGGAATACTGGTC
GCATTTGCACTCTGCAGAATCACATTGAGGCTACCGATTATTTCTTTTGT
ACTTCTTTAATATCTCTTTGCTGTTAATTTTCTATTGCTTTAACAGCAAA
GAGAAATTAAAAGTGTAAGTAGATGTATAGTATCCCTTTAGCATAGCCCG
GCTAGTGAGAACAAAAAAGGAAGAGGAATGTTTTTCCCTTCATTAGGTTT
AGTTTGCTGAATTGTGTGCACCCAGGCTTCCTTGTTAATTTACAGAAGCC
AATGTGTTCTGTAATTGTGCCAATTTTTCATAAAAACAATTT
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