DR403523

Overview
NameDR403523
Unique NameDR403523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3624 contig Csv1_Contig3624:453..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKKIGSI 237
            ACG G ++C  IQ G +CY PN ++ HAS+AFNSYYQK+ R +GSCDF G A + T  P +G C FP    VG +  ++
Sbjct:  291 ACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQTV 369          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 6.358e-16
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFP 201
            ACG G  DC  + +G +CY+P+ + AH++YAFN+YYQK  + +GSCDF G A V T  P  G C FP
Sbjct:  379 ACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFP 445          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 198
            ACG+G A+C  IQ G  CY PN +++HAS+AFN YYQK     G+CDF G A   T+ P Y  C +
Sbjct:  381 ACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.951e-14
Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 198
            ACG G  DC PI++G TCY+P+ + AHA+YAF++YY +      +C+F G A + T  P +G C F
Sbjct:  387 ACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF 452          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTG 207
            ACG G  DC  IQ G  C++PN + +HA+YA N Y+QK  ++   CDF   A V +Q P Y  C +P G
Sbjct:  383 ACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGG 450          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 1
Query:   13 GGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 198
            G  DC+PIQ G  C+ PN+L+AHASY  N+YYQ       +CDF G   V +  P YG C++
Sbjct:  398 GFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 198
            ACG G  DC  +Q    C++P+T+ +HASYAFN+YYQ+    +  C F GA+  V + P YG C +
Sbjct:  410 ACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 204
            ACG+GGADC PIQ+G  C DP  ++  AS+ FN+YY K   +  +C+F   A + +  P  G C++P+
Sbjct:   60 ACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPS 127          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 204
            ACG G  DC  IQ    C+ P+TL +HAS+ FNSY+Q+      +C FGGA   V + P Y KC + T
Sbjct:  388 ACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYIT 455          
BLAST of DR403523 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.501e-12
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 1
Query:    1 ACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 204
            ACG G ADC P +   +C++P+ + +H +YA NS++QK+ +  GSC+F G A      P Y  C FPT
Sbjct:   40 ACGNG-ADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPT 106          
The following BLAST results are available for this feature:
BLAST of DR403523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
E131_ARATH1.788e-1849.37Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E133_ARATH6.358e-1650.75Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E134_ARATH9.181e-1550.00Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E132_ARATH5.951e-1445.45Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E137_ARATH8.593e-1344.93Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT1.122e-1246.77Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1312_ARATH1.122e-1243.94Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13L1_ARATH1.466e-1242.65Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]
E1313_ARATH1.914e-1245.59Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13L2_ARATH9.501e-1242.65Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241F17 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241F17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403523 ID=DR403523; Name=DR403523; organism=Citrus sinensis; type=EST; length=430bp
GCCTGTGGCGAGGGAGGCGCTGATTGCCGACCGATTCAAGAGGGCGCCAC
GTGTTACGATCCTAACACGTTAGAAGCCCATGCATCGTATGCCTTCAATA
GTTATTATCAGAAGCAAGTGCGTAAGGCTGGATCTTGTGATTTTGGTGGT
GCGGCCTACGTGGTCACGCAGGCTCCTAAATATGGAAAATGCCAGTTCCC
AACTGGCTATTGAGTGGGAAAAAAAATAGGGAGCATTAGCTGATTTGTGG
TCGCGGCTTACGATTGGTGATGATTTTTTCTGATAGATTTAGAGGATTGG
AACATTAATTTTTCTCCCTTGTATTTAAATTTTACGCTGAGTGGGGTGGG
GGTTGTTATCCAGTTGGTTTGACTCTAGTGTCAATATGNNNAAATCCTTA
TTGTATTTATTCTAATGATCATGAATTTAG
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