DR403501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.201e-82 Identity = 153/198 (77.27%), Postives = 161/198 (81.31%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 LLGAC IHKDTNLAR SEKLFELDP+NVGYHVLLSNI+SA+R+Y QAATVRQ KKRKLAKAPG TLIE+G TPHVFTSGDQ HPQ IY LEKL GKMREAG+Q ET A SE+LAIAFGLIATEPGTEIRIIKNLRVCLDCHT TK ISK+T RVIVVRDANRFHHFKDGVCSCGDYW Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.295e-52 Identity = 104/200 (52.00%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GA+LGAC IHK+ N A A+E+LFEL+P++ GYHVLL+NIY A + + VR + ++ L K PGC+++E+ H F SG HP S IYA LEKL ++EAG+ +T SEKLAI+FGL+ T GT I + KNLRVC DCH ATK+IS VTGR IVVRD RFHHFK+G CSCGDYW Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.284e-51 Identity = 97/199 (48.74%), Postives = 125/199 (62.81%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 +LL AC IHK+ LA ++ +LFELD N GY++LLS+IY+ + VR ++K R L K PG +L+E+ G HVF GD+ HPQ IY L +LN K+ EAG+ + T + SEKLAIAFG++ T PG+ + ++KNLRVC DCH K ISK+ R VVRDA RFHHFKDG CSCGDYW Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.482e-48 Identity = 96/200 (48.00%), Postives = 126/200 (63.00%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALL AC +H + +L ++ASE LFE++PE+VGYHVLLSN+Y++ + +R + + L K PG + +EV VF +G+Q HP +Y L L K++ G+ + SE+LAIAF LIAT T IRI KNLRVC DCH+ TKFISK+T R I+VRD+NRFHHFK+GVCSCGDYW Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.632e-48 Identity = 86/200 (43.00%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 G LLGA +H +T LA A++K+F ++PEN G +VLLSN+Y++ + +R ++ + + K PG + IE+ H F+ GD+ HP+ I+A LE+L+ +M++AG+ ++T SE+LA+A+G++ G IR+IKNLRVC DCH A K+++++TGR+I++RD NRFHHFKDG CSCGDYW Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.607e-48 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALLGAC I+K+T +A L ++ PE+ GY+VLLSNIY+ + + ++R ++K++ + K PG +LIE+ G + FT GD Q HP+ I E++ GK+R G++ T A SEKLAIA+G++ T+PGT IRI+KNLRVC DCHT TK IS+V GR ++VRD NRFHHF++GVCSC DYW Sbjct: 422 GALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.255e-47 Identity = 92/199 (46.23%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 ++LG+C +H D L + +E L L+ +N G +VLLSNIY++ DY A VR ++K++ + K PG + IE+ H F +GD+ H +S IY ML K++ +++ G+ T T SE+LAIA+GLI+T+PG+ ++I KNLRVC DCHT TK ISK+TGR IV+RD NRFHHF DG CSCGD+W Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.795e-47 Identity = 90/199 (45.23%), Postives = 125/199 (62.81%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 +LL AC +H + L +E L +++PEN G +VLLSNIY++ + + A R ++ + + K PGC+ IE+ H F GD+ HP++ IY MLE++ + +AGF +T SEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK ISK+ R I+ RD RFHHF+DGVCSC DYW Sbjct: 543 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.227e-47 Identity = 95/205 (46.34%), Postives = 127/205 (61.95%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTE-----IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALLGAC +H DT++ +A++KLF+L PE GY+VLLSNIY+ + + +R ++K + L K PG + +EV H F GD+ HPQS IY L+ L KM+E G+ ++ +A SEKLAI F L+ T+ E IRI KNLR+C DCH A K IS++T R I++RD NRFH F+ GVCSCGDYW Sbjct: 482 GALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.133e-47 Identity = 95/201 (47.26%), Postives = 127/201 (63.18%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALLGAC H +LA VA++KLFE +P+N G +VLLS+I ++ + A VR+ ++ ++K PGC+ IEVG H+FT G + HP+ I MLEK +G +REAG+ + SE+LA+A+GL+ G IR++KNLRVC DCH A K ISKVT R I++RDANRFHHF +G CSC DYW Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704 The following BLAST results are available for this feature:
BLAST of DR403501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403501 ID=DR403501; Name=DR403501; organism=Citrus sinensis; type=EST; length=746bpback to top |