DR403500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3BB_ARATH (Uncharacterized protein At4g14342 OS=Arabidopsis thaliana GN=At4g14342 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.542e-41 Identity = 78/87 (89.66%), Postives = 84/87 (96.55%), Query Frame = 3 Query: 102 MQASDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 MQASD FNINSQL HLQAKYVGTGHADL+RFEWAVNIQRDSYASY+GHYP+L+YFAIAENESIGRE YNFMQKMLLPCGLPPERE++ Sbjct: 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREEE 87
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3BA_ARATH (Uncharacterized protein At3g23325 OS=Arabidopsis thaliana GN=At3g23325 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.542e-41 Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 3 Query: 102 MQASDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 MQASD FNINSQL HLQAKYVGTGHADL+RFEW VNIQRDSYASY+GHYP+L+YFAIAENESIGRE YNFMQKMLLPCGLPPERED+ Sbjct: 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREDE 87
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3B5_DROME (Probable splicing factor 3B subunit 5 OS=Drosophila melanogaster GN=CG11985 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.549e-25 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 120 FNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 +NI+SQL HLQ+KY+GTGHAD +FEW N RDS ASY+GHY IL YFAIAENES R +N M++ML PCG PPE+ +D Sbjct: 5 YNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 85
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3B5_HUMAN (Splicing factor 3B subunit 5 OS=Homo sapiens GN=SF3B5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.507e-24 Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 111 SDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 +D + I+SQL HLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML PCG P ++ ++ Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3B5_BOVIN (Splicing factor 3B subunit 5 OS=Bos taurus GN=SF3B5 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.507e-24 Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 111 SDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 +D + I+SQL HLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML PCG P ++ ++ Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3B5_MOUSE (Splicing factor 3B subunit 5 OS=Mus musculus GN=Sf3b5 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.396e-23 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 111 SDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 +D + I+SQL HLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML P G P ++ ++ Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPSGPPADKPEE 85
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: SF3B5_DICDI (Splicing factor 3B subunit 5 OS=Dictyostelium discoideum GN=sf3b5 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 44/84 (52.38%), Postives = 62/84 (73.81%), Query Frame = 3 Query: 111 SDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 362 S+ ++NSQL HLQ +YVGTGHAD+++ EW N RDS +S++GH L+ F+IAENES+GR YN + KM+ PCG P+ +D+ Sbjct: 2 SERESLNSQLEHLQMRYVGTGHADISKHEWLTNQHRDSLSSFIGHSSFLSLFSIAENESVGRVRYNTLTKMISPCGPAPKIKDN 85
BLAST of DR403500 vs. ExPASy Swiss-Prot
Match: YHV5_SCHPO (Uncharacterized protein C211.05 OS=Schizosaccharomyces pombe GN=SPBC211.05 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 111 SDGFNINSQLGHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGREHYNFMQKMLLPCGLPP 347 +D ++L LQA+YVG G+A ++EW VN RD+ +S VGH P+LAY A A E + N ++KM++PCG PP Sbjct: 2 ADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEPRVQVRKNLLEKMIMPCGPPP 80 The following BLAST results are available for this feature:
BLAST of DR403500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403500 ID=DR403500; Name=DR403500; organism=Citrus sinensis; type=EST; length=602bpback to top |