DR403488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.485e-38 Identity = 74/84 (88.10%), Postives = 82/84 (97.62%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 MECVFGLVG+GF I+ ADTSAVHSIL+HK+NEDKIMVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFT Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.920e-37 Identity = 72/84 (85.71%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 MECVFGLVG+GF I+ ADTSAVHSIL+HK+ EDKIM LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFT Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_ORYSJ (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 4.497e-32 Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 MECV G+VG F ++ ADTSAV SILVHK++EDK+MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFT Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_DICDI (Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.305e-18 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANF 303 ME + G + +AD+S HSI+ K +EDKI+ +D HKL+ ++GE GDRVQFTE+I KN+ LY RN P++T AAANF Sbjct: 1 METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANF 83
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_CRYNE (Probable proteasome subunit beta type-2 OS=Cryptococcus neoformans GN=CPR1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.421e-14 Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAA 297 MEC FG+ G + IL +D A SI+ KS+E+K+ L H +A SGEPGD F E+I++N+ LY RN PL AA+ Sbjct: 1 MECSFGITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAAS 81
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_NEUCR (Probable proteasome subunit beta type-2 OS=Neurospora crassa GN=15E6.60 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.099e-13 Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANF 303 M + G+ G FTI+ A +A+ + K+++DK L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF Sbjct: 1 MYVLLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANF 83
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_RAT (Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFT Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_MOUSE (Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFT Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFT Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFT 84
BLAST of DR403488 vs. ExPASy Swiss-Prot
Match: PSB2_BOVIN (Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 55 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFT 306 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFT Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFT 84 The following BLAST results are available for this feature:
BLAST of DR403488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403488 ID=DR403488; Name=DR403488; organism=Citrus sinensis; type=EST; length=306bpback to top |