CX053473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053473 vs. ExPASy Swiss-Prot
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.547e-28 Identity = 60/128 (46.88%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 438 FCPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGADPTDQ-----DLHLNTRNSDGIVGGVHGVESLSPEDLTVIANGTLKAWE 806 FC EVF+G++GHLI+TCR + RR NR+HEW+ GS++DILVPVE++HL + Q VI H +RFD++RVPA++ELC QAGA ++ ++H N + S+ + SL DL + L AWE Sbjct: 90 FCSEVFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPEEILQYSEIHDNPQISE------EDIRSLPAGDLKYVGANALMAWE 211 HSP 2 Score: 80.4925 bits (197), Expect = 1.235e-14 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 229 WGELSNGQRF-YSSKF---------DLKKLRPMIMKRIENRAKDYPIRDMVPVAREVLKARALLIRGVSTLIKVFPVQAC-FALKCLLGRK 468 W +LS+ QR YS+ DL+KLRPMI+KRIENRAKDYP++++VPVA E+L AR LI ++ L+KVFPV C F + +G++ Sbjct: 9 WRKLSSFQRASYSTTSSRNNKLKLDDLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKE 99
BLAST of CX053473 vs. ExPASy Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.088e-18 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 441 CPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGAD 677 C V + GH I+ C G + H W+ G+++D+L+PVE++H+ F I+H RF++ER+PA+VELC QAG + Sbjct: 159 CGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVE 237 HSP 2 Score: 35.039 bits (79), Expect = 2.088e-18 Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 1 Query: 280 KKLRPM-IMKRIENRAKDYPIRDMVPVAREVLKARALLIRGVSTLIKVFPVQAC 438 KKL M I K+++ + ++VPVA +V+ LLI+G++ L+ V PV AC Sbjct: 103 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFAC 156
BLAST of CX053473 vs. ExPASy Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.390e-16 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 438 FCPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGAD 677 +C E+ +G GH ++C+G + +HEW + ++D++VP+EA+HL I H++RF RVPAVVELC Q G + Sbjct: 165 WCNEIHVGPYGHPFKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVE 244 HSP 2 Score: 30.4166 bits (67), Expect = 1.390e-16 Identity = 21/63 (33.33%), Postives = 31/63 (49.21%), Query Frame = 1 Query: 286 LRPMIMKRIENRAKDYP------------IRDMVPVAREVLKARALLIRGVSTLIKVFPVQAC 438 LR +R++N KD P ++ +VP+A +V AR LI + L+KV V AC Sbjct: 102 LRRAARERVKNN-KDKPKRPLPPPKNGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNAC 163 HSP 3 Score: 68.9366 bits (167), Expect = 3.694e-11 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 438 FCPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGA 674 +CPEV +G GH Q C F+ + +N H W S LDD++ P +H+ + P ++ R + + PAVVE+C QAGA Sbjct: 335 YCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGA 413 The following BLAST results are available for this feature:
BLAST of CX053473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX053473 ID=CX053473; Name=CX053473; organism=Citrus sinensis; type=EST; length=810bpback to top |