CX053472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053472 vs. ExPASy Swiss-Prot
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 4.552e-82 Identity = 140/242 (57.85%), Postives = 179/242 (73.97%), Query Frame = -1 Query: 139 FCPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGADPTDQ-----DLHLNTRNSDGIVGGVHGVESLSPEDLTVIANGTLKAWETLRSGVQRLTLVYPVKVCEHCSEVHVGPSGHKARLCGVFKYESWRGTHFWKKAGVDDLVPPKIVWHRRPQDPPVLLDEGRGYYGHAPAVVDLCTKAGVVPPTKYFTMIKVLGRS 849 FC EVF+G++GHLI+TCR + RR NR+HEW+ GS++DILVPVE++HL + Q VI H +RFD++RVPA++ELC QAGA ++ ++H N + S+ + SL DL + L AWE +R+GV++L LVYP KVC+ C EVHVGPSGHKARLCGVFKYESWRGTH+W+KAGV+DLVP K+VWHRRPQDP VL+DEGR YYGHAPA+V LC+ G + P KY +K G S Sbjct: 90 FCSEVFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPEEILQYSEIHDNPQISE------EDIRSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQGLS 325
BLAST of CX053472 vs. ExPASy Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.450e-45 Identity = 94/255 (36.86%), Postives = 141/255 (55.29%), Query Frame = -1 Query: 169 FCPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGADPTDQDLHLNTR------NSDGIVGG---------------------VHGVESLSPEDLTV-IANGTLKAWETLRSGVQRLTLVYPVKVCEHCSEVHVGPSGHKARLCGVFKYESWRGTHFWKKAGVDDLVPPKIVWHRRPQDPPVLLDEGRGYYGHAPAVVDLCTKAGVVPPTKY 849 +C E+ +G GH ++C+G + +HEW + ++D++VP+EA+HL I H++RF RVPAVVELC Q G + + + S+ + V + S E+ TV +A TL+AWE +R+G ++L +Y V+VC +C EVHVGP+GHKA+ CG FK++ G H W+ A +DDL+PP+ VWH + P + E R +YG APAVV++C +AG V P Y Sbjct: 165 WCNEIHVGPYGHPFKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHY 419
BLAST of CX053472 vs. ExPASy Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.015e-42 Identity = 90/264 (34.09%), Postives = 138/264 (52.27%), Query Frame = -1 Query: 151 CPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHLRKMFQPVIEHNQRFDFERVPAVVELCWQAGADPTDQDLHLNTR-----------------------NSDGIVGGVHGVESL---------SPEDLTVIANGTLKAWETLRSGVQRLTLVYPVKVCEHCSEVHVGPSGHKARLCGVFKYESWRGTHFWKKAGVDDLVPPKIVWHRRPQDPPVLLDEGRGYYGHAPAVVDLCTKAGVVPPTKYFTMIKV 846 C V + GH I+ C G + H W+ G+++D+L+PVE++H+ F I+H RF++ER+PA+VELC QAG + + T+ S + + +++L +PED+ IA T+ A+E +R GV +L + VK C +CSEVHVGP GH +LCG FK++ G H W+ A VD++ PP VWH R L R +YG APA+V++C +G P +Y M+++ Sbjct: 159 CGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRL 422 HSP 2 Score: 67.781 bits (164), Expect = 9.366e-11 Identity = 38/115 (33.04%), Postives = 55/115 (47.83%), Query Frame = -1 Query: 178 DLTVIANGTLKAWETLRSGVQRLTLVYPVKVCEHCSEVHVGPSGHKARLCGVFKYESWRGTHFWKKAGVDDLVPPKIVWHRRPQDPPVLLDEGRGYYGHAPAVVDLCTKAGVVPP 522 +L +A+ + W+ L G+ +L V PV C C VHV GH R C RG+H W K ++D++ P +H + E R Y PA+V+LC +AGV P Sbjct: 125 NLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIP 239
BLAST of CX053472 vs. ExPASy Swiss-Prot
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.072e-34 Identity = 81/258 (31.40%), Postives = 135/258 (52.33%), Query Frame = -1 Query: 151 CPEVFIGEKGHLIQTCRGFRRRAKNRVHEWISGSLDDILVPVEAFHL-RKMFQPVIEHNQRFDFERVPAVVELCWQAGADPTDQDLHLNTRNSDGIVGGVHGVESLS------------------------PEDLTVIANGTLKAWETLRSGVQRLTLVYPVKVCEHCSEVHVGPSGHKARLCGVFKYESWRGTHFWKKAGVDDLVPPKIVWH-RRPQDPPVLLDEGRGYYGHAPAVVDLCTKAGVVPPTKYFTMIKV 846 C EV IG++GH I+TC G +++ H W G + D+++ + FHL + +P + H++RF ++ AV+ELC QAG D ++ I G + E ++ + L ++ T+++W + GV++L Y V C +C E+ VGP GHK R+C K++ G H W++A +DD+V P VWH R P D VL + + +YG APAV+++C + G P +Y +M+++ Sbjct: 131 CAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFEDVNDGNSELAVTSTTTLIQEDDRCKEEKKSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRL 388 The following BLAST results are available for this feature:
BLAST of CX053472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX053472 ID=CX053472; Name=CX053472; organism=Citrus sinensis; type=EST; length=876bpback to top |