DR403479

Overview
NameDR403479
Unique NameDR403479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length169
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13727 contig Csv1_Contig13727:1..166. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DR403479 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.547e-14
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 3 
Query:   54 MAPKQPSTGLFVGLNKGHIVTKKELPPRPADRKGKTSK 167
            MAPKQP+TGLFVGLNKGHIVTKKEL PRP+DRKGKTSK
Sbjct:    1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSK 38
The following BLAST results are available for this feature:
BLAST of DR403479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RL36_DAUCA5.547e-1492.1160S ribosomal protein L36 OS=Daucus carota GN=RPL3... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241D02 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403479 ID=DR403479; Name=DR403479; organism=Citrus sinensis; type=EST; length=169bp
GGGGACTCCGACTCATCTTATGTTTCCGCAGCAACTCACTTTCGTCGGAG
GTGATGGCTCCGAAACAGCCAAGTACTGGTCTCTTTGTTGGATTAAACAA
GGGTCATATTGTGACGAAGAAGGAACTGCCGCCACGCCCAGCAGATCGCA
AAGGGAAAACAAGCAAAAG
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