DR403471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPE 95
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPE 95
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPE 95
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPE 95
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.164e-13 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+ T+ K+ DN P+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPE 95
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.092e-13 Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 435 TIWVGDLHHWMDENYLHSCFASTGEIA-SIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTDQP--FRLNWATFSTGDKRSDNGPD 710 ++W+GDL +MDEN++ F++ GE A +K+I ++ TG S GY FVE A+ ++ +Q L+P ++ P F+LN+AT+ KR + GP+ Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPE 98 HSP 2 Score: 23.483 bits (49), Expect = 4.092e-13 Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 712 FLXFVGDLAADVTXXLLHETF 774 F FVGDL ++V LH+ F Sbjct: 99 FSVFVGDLTSEVDDYQLHQFF 119
BLAST of DR403471 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 411 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSE--GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWAT 671 G G + T+W+GDL WMD ++ +AS E ++KV+R+K + Y FV+F + A AE+ L Y + ++P F+LNWAT Sbjct: 78 GVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWAT 166 The following BLAST results are available for this feature:
BLAST of DR403471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403471 ID=DR403471; Name=DR403471; organism=Citrus sinensis; type=EST; length=779bpback to top |