DR403458

Overview
NameDR403458
Unique NameDR403458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_MALDO (Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 9.507e-75
Identity = 136/181 (75.14%), Postives = 152/181 (83.98%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA  QA+A RNS G GLGLAICKRFVNLMEGHIWIESEG GKGCTA FIVKLG PE SN+S L F PK+   H QTNFPGLKVLVMD+NGVSRSVTKGLL HLGCDV  VS ++E   V+S EH+VVFMDV +PGIDGYE+AV IH+KFT+RHERP++VALTGS D +TK NCMRVG+
Sbjct:  531 FTKFAQTQALATRNSGGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTATFIVKLGFPERSNESKLPFAPKLQANHVQTNFPGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHKVVFMDVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGV 711          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_PRUPE (Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 5.217e-73
Identity = 134/181 (74.03%), Postives = 153/181 (84.53%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA  Q++A RNS G GLGLAICKRFVNLMEGHIWIESEG GKGCTAIFIVKLG  E SN+S L F+ K+   H QTNFPGLKVLVMD+NG   SVTKGLL+HLGCDV TVSS++E   V+S EH+VVFMDVC+PGIDGYE+AV IH+KFT+RHERP++VALTG+ D +TK NCMRVGM
Sbjct:  531 FTKFAQTQSLATRNSGGSGLGLAICKRFVNLMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEHKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGM 708          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR2_PELHO (Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.421e-70
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA  Q +A +NS G GLGLAICKRFVNLMEGHIWI+SEG GKGCTA F+VKLGIPE S++  L  +PK+P  HGQTNF GLKVL++D+NGVSR+VT+GLL HLGCDV TVSS +E  +VVS +++VVFMDVC+P +DG+E+AV IH+KF  RHERPLIVALTG+ D +TK NC RVGM
Sbjct:  531 FTKFAQTQPVATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATFVVKLGIPERSSEPKLLLMPKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQDYKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGM 711          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_PASED (Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.051e-69
Identity = 129/181 (71.27%), Postives = 148/181 (81.77%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            F KFA  Q    RNSSG GLGLAIC+RFVNLM+GHIW+ESEG GKGCTAIFIVKLGIPE  N+S   F+ K+ V HGQT FPGLKVL+MD+NGVSR VTKGLLLHLGCDV TV S EEC +V S +H+VVFMDV +P  +G+E AV +H+KFT+RHERPL+VALT STD +TK NCMRVGM
Sbjct:  531 FIKFAQTQTTGARNSSGSGLGLAICRRFVNLMDGHIWLESEGLGKGCTAIFIVKLGIPERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHRVVFMDVGMP--EGFEAAVRLHEKFTKRHERPLVVALTASTDRMTKENCMRVGM 709          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_TOBAC (Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.018e-68
Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            F KFA NQA+A ++S G GLGLAI KRFVNLMEGHIWIESEG GKG TAIFIVKLGIP  SN+  L F+P++P  H Q  F GLKVL+MD+NG SR VTKGLL+HLGCDV TVSS +EC +V++ EH+VVFMDV +PGID YEVAV IH+KF + H RPLIVALTG+TD +TK NCMRVGM
Sbjct:  529 FCKFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGM 709          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.018e-68
Identity = 129/181 (71.27%), Postives = 148/181 (81.77%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            F+KF  +QA+A  NS G GLGLAICKRFVNLMEGHIWIESEG GKG TAIFI+KLGIP  +N+S L F+ K+P  H Q +F GLKVLVMDENGVSR VTKGLL HLGCDV TV S +EC +VV+HEH+VV MDV + GID YEVAV IH++F +RH RPLIVALTG+TD +TK NCMRVGM
Sbjct:  545 FSKFTQSQALATTNSGGTGLGLAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGM 725          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_PELHO (Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.962e-68
Identity = 123/181 (67.96%), Postives = 150/181 (82.87%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA +Q +A +NS G GLGLAI KRFVNLM+GHIWI+SEG  KGCT  F+VKLGIPE SN+  L  +PK+  +  QT+FPGLKVL+MDENG+SR VTKGLL+HLGCDV +VSS EEC ++VS +H+VVFMDV VPG+DG+E+AV IH+KF +RHERPLIVALT + D +TK NC+RVGM
Sbjct:  531 FTKFAQSQPVATKNSGGSGLGLAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHKVVFMDVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKENCLRVGM 711          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_ARATH (Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 9.529e-67
Identity = 125/182 (68.68%), Postives = 151/182 (82.97%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMP-VHGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTR-RHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA  Q++A R+S G GLGLAI KRFVNLMEG+IWIES+G GKGCTAIF VKLGI E SN+S  S IPK+P +   +NF GLKVLVMDENGVSR VTKGLL+HLGC+V TVSS EEC +VVSHEH+VVFMDVC+PG++ Y++A+ IH+KFT+ RH+RPL+VAL+G+TD  TK  CM  G+
Sbjct:  527 FTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESDGLGKGCTAIFDVKLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGL 708          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_BRAOL (Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.625e-66
Identity = 126/181 (69.61%), Postives = 148/181 (81.77%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQ-TNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA  Q++A R+S G GLGLAI KRFVNLMEG+IWIESEG GKGCTAIF VKL I   SN+S  S IPK+P + Q  NF GLKVLVMDENGVSR VTKGLL+HLGC+V TVSS EEC +VVSHEH+VVFMDVC PG++ Y++A+ IH+KFT+RH+RPL+VALTG+TD  TK  CM  G+
Sbjct:  528 FTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESEGVGKGCTAIFDVKLAI---SNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGL 705          
BLAST of DR403458 vs. ExPASy Swiss-Prot
Match: ETR1_CUCSA (Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.229e-65
Identity = 120/181 (66.30%), Postives = 144/181 (79.56%), Query Frame = 2
Query:    5 FTKFALNQAIALRNSSGXGLGLAICKRFVNLMEGHIWIESEGHGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKGNCMRVGM 544
            FTKFA    +  RNS G GLGLAICKRFVNLMEGHIW+ESEG GKGCTA FIVKLGI E SN+S L F  K+  +   T+FPGLKVLVMD+NGVSRSVTKGLL+HLGC+V T  S+EE  +VVS EH+VVFMD+C PG+DGYE+A+ I +KF + HERP +V LTG++D +TK +C+R GM
Sbjct:  531 FTKFA-QTTVGPRNSCGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQSNESKLPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGM 710          
The following BLAST results are available for this feature:
BLAST of DR403458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ETR1_MALDO9.507e-7575.14Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 ... [more]
ETR1_PRUPE5.217e-7374.03Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 S... [more]
ETR2_PELHO1.421e-7069.61Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_PASED2.051e-6971.27Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=... [more]
ETR1_TOBAC1.018e-6870.72Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=... [more]
ETR1_SOLLC1.018e-6871.27Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR1_PELHO2.962e-6867.96Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_ARATH9.529e-6768.68Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR... [more]
ETR1_BRAOL1.625e-6669.61Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 P... [more]
ETR1_CUCSA5.229e-6566.30Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAC-PNP1241B19 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241B19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403458 ID=DR403458; Name=DR403458; organism=Citrus sinensis; type=EST; length=576bp
GGGATTTACAAAATTTGCACTAAATCAAGCAATTGCACTAAGAAATTCTA
GTGGNNNTGGACTTGGCCTGGCTATTTGTAAGAGGTTTGTGAATCTTATG
GAGGGACATATCTGGATTGAAAGTGAAGGTCATGGAAAGGGTTGTACTGC
CATCTTCATTGTAAAACTTGGGATTCCGGAGCACTCAAATGATTCTAACC
TCTCCTTTATTCCAAAAATGCCGGTACACGGACAGACCAATTTTCCAGGG
CTTAAAGTACTTGTCATGGATGAAAATGGTGTTAGCAGGTCAGTGACTAA
GGGACTTCTGTTGCACCTGGGATGTGATGTAATGACGGTGAGCTCTGTTG
AGGAGTGCTTCCAAGTTGTTTCTCACGAACACCAGGTGGTCTTCATGGAC
GTTTGCGTGCCTGGAATTGATGGTTATGAAGTCGCTGTCCATATACATGA
CAAATTTACGAGGCGTCATGAAAGGCCATTAATAGTAGCCCTTACTGGAA
GTACTGACAATTTGACCAAGGGTAATTGCATGAGGGTTGGAATGGGATGG
GAGTTATCCTAAAACCTGTTTCACTT
back to top