EY692781

Overview
NameEY692781
Unique NameEY692781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692781_ssr13 microsatellite EY692781_ssr13:13..22. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10573 contig Csv1_Contig10573:28..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 79/193 (40.93%), Postives = 120/193 (62.18%), Query Frame = 2
Query:   53 KYFLILLAIFSYLNSSSASRHCPSKIAADRRVIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLI---KASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKV---VRAXIVKIAHMTSNALGLINSYAS 613
            K  L+  A+   L ++SA        A   + IKTSC+ TTYP +C +SL+ +A  IQ +P+ LA  +L V+L   +     M +++K  G+K R+  A+ DCLEE+ DS+D + +S  EM  +   K ++F   MS+++TWVSAALTDETTC D F    ++GK+   VRA +V +A +TSNAL L+N++A+
Sbjct:    5 KSTLVFSALLVILAAASA--------APANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20
Identity = 61/190 (32.11%), Postives = 106/190 (55.79%), Query Frame = 2
Query:   62 LILLAIFSYLNSSSASRHCPSKI----AADRRVIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKM-SKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLI-KASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXI---VKIAHMTSNALGLINS 604
            L+LLA    + +++ +++   KI    +    ++K+ CSST YP LC+ ++A       TS K +  ASLN+T    K     + K+ +K  G+ PREV A+ DCLE + +++DEL  ++ ++    K  +      D++T +S+A+T++ TC D F  +  + KV +A +   V + HM SNAL +I +
Sbjct:   29 LLLLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKN 218          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 50/158 (31.65%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  146 VIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKM-SKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLIKA-SNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXI---VKIAHMTSNALGLINS 604
            V+++SCSST YP LC  ++     +  TS K +  AS+N+T+   +     + K+  K  G+ PRE  A+ DCLE + +++DEL +++ ++ L            D++T +S+A+T++ TC D F  +  + +V +A +   + + HM SNAL +I +
Sbjct:   58 VLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKN 215          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15
Identity = 54/160 (33.75%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  146 VIKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEM-GLIKASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXI----VKIAHMTSNALGLINS 604
            ++K+SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +      D++T +SAA+T++ TC D F  +  N K VR  +    V +  M SNAL +I +
Sbjct:   68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15
Identity = 54/160 (33.75%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  146 VIKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEM-GLIKASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXI----VKIAHMTSNALGLINS 604
            ++K+SCSST YP LC+ ++A    AS   TS K +   SLN+T    +     + K+ K   +  RE  A+ DCLE + +++DEL K++ ++       +      D++T +SAA+T++ TC D F  +  N K VR  +    V +  M SNAL +I +
Sbjct:   68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15
Identity = 49/158 (31.01%), Postives = 91/158 (57.59%), Query Frame = 2
Query:  146 VIKTSCSSTTYPTLCYKSLARHASLIQ--TSPKLLAHASLNVTL-AMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLI-KASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXIVKIAH---MTSNALGLI 598
            ++K++CS+T +P LCY ++   +   +  TS K +   SLN+T+ A+ ++  AV   +    G+ PRE  A+ DCLE + +++DEL  ++ ++ L     + +  + D++T +S+A+T++ TC D F  +  + KV +  +    H   M SNAL +I
Sbjct:   65 IVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 49/185 (26.49%), Postives = 86/185 (46.49%), Query Frame = 2
Query:   62 LILLAIFSYLNSSSASRHCPSKIAADRRVIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTL---AMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLIKASNFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXIV----KIAHMTSNALGL 595
            ++   IF+ + +  + +  P       + I  +CS + YP LC  +L      +      L H S N TL   + A  TS+ +        M PR   A   CLE L DS+D L +++  + ++       + SD+ TW+S+A+T+  TC+D F++    G  V+  ++     ++ M SN L +
Sbjct:   46 VVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ----MPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE---SHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223          
BLAST of EY692781 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11
Identity = 48/182 (26.37%), Postives = 79/182 (43.41%), Query Frame = 2
Query:   95 SSSASRHCPSKIAADRRVIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKMSKSPGMKPREVDAMQDCLEELSDSIDELRKSIGEMGLIKAS-NFELTMSDIQTWVSAALTDETTCSDVFEKNTVNGKVVRAXIVKI-------AHMTSNALGLINSYASL 616
            SS +S   P    +    +K  C +T YP+ C+ S++       T P+LL   SL V +      S+   K+  +     R   A+  C     D++D L  SI  +G +        ++S+++TW+SAALTD+ TC D      +N    R  + +I           SN+L ++     L
Sbjct:   59 SSPSSDSVPQTELSPAASLKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAI---DELSSFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSASVSNVETWLSAALTDQDTCLDAV--GELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGL 235          
The following BLAST results are available for this feature:
BLAST of EY692781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
21KD_DAUCA1.864e-3340.9321 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME2_ARATH2.364e-2032.11Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH3.773e-1831.65Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME3_CITSI1.028e-1533.75Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.028e-1533.75Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC1.753e-1531.01Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME61_ARATH2.798e-1326.49Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_PHAVU9.953e-1126.37Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692781 ID=EY692781; Name=EY692781; organism=Citrus sinensis; type=EST; length=769bp
AATTTCAAAGTCAGAGAGAGAGACTGGAAGGTTCATCCTCAAATATATGC
TTAAATACTTTCTCATTTTACTAGCCATTTTTTCCTACTTAAATTCAAGC
TCAGCCTCTAGACATTGCCCCTCTAAAATTGCTGCTGACAGAAGGGTCAT
CAAAACATCTTGCAGTTCAACAACTTATCCAACACTTTGCTATAAATCCC
TTGCTAGACATGCAAGCTTAATCCAAACAAGCCCTAAGCTCCTCGCCCAT
GCATCCCTCAACGTGACCCTTGCAATGGCTAAATCAACGTCAGCCGTCAT
GTTAAAGATGTCGAAAAGCCCTGGAATGAAGCCTAGAGAGGTGGATGCCA
TGCAAGATTGCTTGGAGGAGCTGAGTGATTCAATTGATGAGCTCAGAAAG
TCCATTGGCGAAATGGGTCTGATCAAAGCTTCAAATTTTGAACTTACAAT
GAGTGATATACAGACTTGGGTTAGTGCTGCTTTGACTGATGAGACTACTT
GCAGCGATGTATTTGAGAAGAATACAGTGAATGGGAAAGTTGTGAGGGCC
CANATTGTGAAGATTGCTCATATGACTAGCAATGCCTTGGGCTTGATCAA
TAGTTATGCTTCTCTTCCCGGGTAGATATTCTCATGATTAGCTGCATTAT
TGTGAGTGATTTATGCAGGATTAATCCTGCCTGTGGAGATCAGATTTATG
AAAATGTGATCCTTACTGCAAGCAAAATACAGATCCAGAAAAAAAAATTG
GATTTAAAAAAAAAAAAAA
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