DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLV 52
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    9 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMV 53
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.263e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.649e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.649e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.649e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.649e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMV 51
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_SOLBR1.263e-1891.11S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_PHALU1.263e-1891.11S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK3_PETHY1.263e-1891.11S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK2_PEA1.263e-1891.11S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK1_SOLTU1.263e-1891.11S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK1_SOLLC1.263e-1891.11S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK4_ARATH1.649e-1891.11S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_ARATH1.649e-1891.11S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK2_BRAJU1.649e-1891.11S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_PICSI1.649e-1891.11S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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