DR403350

Overview
NameDR403350
Unique NameDR403350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length279
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_ARATH (ATP synthase subunit 9, mitochondrial OS=Arabidopsis thaliana GN=ATP9 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.925e-15
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3 
Query:   87 MKKRDENSQPEMLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            M KR+ NSQPEMLEGAKL+                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MTKREYNSQPEMLEGAKLIGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 64
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_TOBAC (ATP synthase subunit 9, mitochondrial OS=Nicotiana tabacum GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.708e-11
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            MLEGAKLM                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 53
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_SOLTU (ATP synthase subunit 9, mitochondrial OS=Solanum tuberosum GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.708e-11
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            MLEGAKLM                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 53
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_SOLLC (ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.708e-11
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            MLEGAKLM                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 53
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_PETHY (ATP synthase subunit 9, mitochondrial OS=Petunia hybrida GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.708e-11
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            MLEGAKLM                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 53
[Close]
BLAST of DR403350 vs. ExPASy Swiss-Prot
Match: ATP9_OENBI (ATP synthase subunit 9, mitochondrial OS=Oenothera biennis GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.708e-11
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  120 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQLFGYAILGF 278
            MLEGAKLM                 NVFSSLIHSVARNPSLAKQLFGYAILGF
Sbjct:    1 MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGF 53
The following BLAST results are available for this feature:
BLAST of DR403350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ATP9_ARATH2.925e-1567.19ATP synthase subunit 9, mitochondrial OS=Arabidops... [more]
ATP9_TOBAC5.708e-1167.92ATP synthase subunit 9, mitochondrial OS=Nicotiana... [more]
ATP9_SOLTU5.708e-1167.92ATP synthase subunit 9, mitochondrial OS=Solanum t... [more]
ATP9_SOLLC5.708e-1167.92ATP synthase subunit 9, mitochondrial OS=Solanum l... [more]
ATP9_PETHY5.708e-1167.92ATP synthase subunit 9, mitochondrial OS=Petunia h... [more]
ATP9_OENBI5.708e-1167.92ATP synthase subunit 9, mitochondrial OS=Oenothera... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L03 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403350 ID=DR403350; Name=DR403350; organism=Citrus sinensis; type=EST; length=279bp
GGGGACGTGGGCAAACCAAGTACGATGCCCAAGAGAAAAGGAACGAGGGG
AAGAATCGACGAGAAATCCATAACAAAAAATCGTGAATGAAAAAGCGTGA
CGAGAATTCTCAACCCGAGATGTTAGAAGGTGCAAAATTAATGGGTGCCG
GAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTG
TTCAGCTCTTTGATCCATTCCGTGGCACGAAATCCATCATTGGCTAAACA
ATTATTTGGTTATGCCATTTTGGGCTTTG
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