FC922064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30 Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMAAASIA+GLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITL+YYI+LGL Sbjct: 550 VMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 618
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEY+VHP ILSTAVIFGMLIALPITLVYYI+LGL Sbjct: 524 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL 592
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29 Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMAAAS AVGLRGTLLHVAIVQAALPQGIVPFVFAKEY+VHP+ILSTAVIFGMLIALPITLVYYI+LGL Sbjct: 527 VMAAASFAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIALPITLVYYILLGL 595
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29 Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMAAASIAVGLRG LLH+AIVQAALPQGIVPFVFAKEYNVHP ILSTAVIFGMLIALPITLVYYI+LGL Sbjct: 486 VMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 554
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMA A+IA+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHPAILST VIFGMLIALPITLVYYI+LGL Sbjct: 572 VMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 640
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.429e-27 Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VM AS AVGLRG LLHVAI+QAALPQGIVPFVFAKEYNVHP ILSTAVIFGMLIALPITL+YYI+LGL Sbjct: 554 VMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.429e-27 Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 VMA A++A+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHPAILST VIFGMLIALPITLVYYI+LGL Sbjct: 551 VMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 619
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.432e-26 Identity = 58/69 (84.06%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 V+AA SIA+GLRG LLHVAIVQAALPQGIVPFVFAKEYN HP ILSTAVIFGMLIALPIT++YY++LG+ Sbjct: 562 VIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.871e-26 Identity = 56/69 (81.16%), Postives = 66/69 (95.65%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 V+AA SIA+G+RG LLH+AIVQAALPQGIVPFVFAKEYNVHP ILSTAVIFGML+ALP+T++YY++LGL Sbjct: 579 VIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYVLLGL 647
BLAST of FC922064 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1 Query: 1 VMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYIVLGL 207 +MA A IA+GL G LL +AIVQAALPQGIVPFVFAKEYNVHP ILST VIFGMLIALPITLVYYI+LGL Sbjct: 548 IMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYILLGL 616 The following BLAST results are available for this feature:
BLAST of FC922064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922064 ID=FC922064; Name=FC922064; organism=Citrus sinensis; type=EST; length=606bpback to top |